Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1173 ATGATCGCTAGAGAAATCCTGACTTTTTTGACTACCAACACTATTGAGCGATACCATCATAGCTCTTTAACTCCTCAAGACGAATACATTGAATGTGAAACTCAGAGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGATTCTCTTCAAAGGACCCAGAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAACATAAAGGAGCTGCAGAATCTTAAGAAACAGCTTGAAAGGGCTTTAGCACAAGCAAGGCAAAGGAAGGGTCAAGCATACTCATTACCTGCAGATATACAGTATCTTGATGCTAGATGGGAAGTTCCTGTTGTGCTTCCTCTGCGTGATTGTTTTGCCCAAGAGATCAACATGCTATGCCGCCTTGATGGGTTTGTAGTCCTCTAG 405 0.4321 MIAREILTFLTTNTIERYHHSSLTPQDEYIECETQSWYQEVSKLKAKYDSLQRTQRHLLGEDLGPLNIKELQNLKKQLERALAQARQRKGQAYSLPADIQYLDARWEVPVVLPLRDCFAQEINMLCRLDGFVVL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1173 134 PANTHER SERUM RESPONSE FACTOR HOMOLOG 13 92 - -
Gso10g1173 134 Pfam K-box region 33 93 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso10g1173 134 ProSiteProfiles K-box domain profile. 34 134 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso10g1173 134 Coils Coil 68 95 - -
Gso10g1173 134 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 13 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1173 Gso-Chr10 35300184 35305354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1173 13 91 MADS-box Gene Family AT2G45650 56.250 1.27e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1173 K09264 - gmx:100805717 268.47