Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1126 ATGGAGAGGTATCTATTAGGCCACTTGCTGAACTACAATGATGAAAAAGGACAAATGCTAAGCGATGACCAAATTGCTGATAATGTAATTGGGGTCCTATTTGAAGCTCAGGATATTACAGCAAGTGTTCTAACCTGGATTCACAAGTATCTTCAGGATGACCACAAACTTCTTGAAGCAATAAAAGTAGAGAAAATGGGAGTATATGAAGCTAATGAAGGAGGGAACATGCCATTGACATGGGGTAGAACAGATCCTAACCAAAACACTGGGATTTGCATTCAAAACTCGTGTGTCATGGCTGCTGAAGACCTAGTTCCTATGCTGAGTTCCTTCAAAACCTTCTTGGGCAGGGCATGGAGGGAATATTCAAGGACCGTGTTCTTGCAAACTTACCTTGATTTGTTGGTAGACCCTACAGGGTGGTTGGAGTGGAAAGGCAATTTTGCCCTCCACACTTTGCATTATAGAGAGTACAAGAACCTTGGTCCTGGGGGTTCCACAATAGGTAGAGTGAAATGGGGTAGTTACCATGCCATAACAAGTGCAACTGAAGCATCCAAATTCACAGTTCAGAATTTTATTGCTGGGAAATCATGCTCTATGGCCACGGGGATTCCATTCTTATTTGGACTCGATGATTAA 645 0.4248 MERYLLGHLLNYNDEKGQMLSDDQIADNVIGVLFEAQDITASVLTWIHKYLQDDHKLLEAIKVEKMGVYEANEGGNMPLTWGRTDPNQNTGICIQNSCVMAAEDLVPMLSSFKTFLGRAWREYSRTVFLQTYLDLLVDPTGWLEWKGNFALHTLHYREYKNLGPGGSTIGRVKWGSYHAITSATEASKFTVQNFIAGKSCSMATGIPFLFGLDD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1126 214 SUPERFAMILY Pectin lyase-like 76 211 IPR011050 -
Gso10g1126 214 Pfam Pectinesterase 81 197 IPR000070 GO:0030599|GO:0042545
Gso10g1126 214 PANTHER PECTINESTERASE 81 211 - -
Gso10g1126 214 Gene3D - 62 212 IPR012334 -
Gso10g1126 214 SUPERFAMILY Cytochrome P450 5 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1126 214 PANTHER PECTINESTERASE 81 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1126 Gso-Chr10 32872863 32874404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1126 82 212 Carbohydrate Esterase AT2G45220 61.832 2.17e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1126 K01051 - gsj:114371647 446.047