Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1115 ATGGGAATGGCTGTGGCGAGTGATGATTTGCTGAGCGAGAAAGCTGCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAGGCCATCACGGACGACGTCGTTTCGATTCTCGGCTCCTTCGATCACCGCCTCTCCGCCCTCGAAACCGCCATGCGCCCCACCCAGATCAGAACGCATTCTATTCGGAAAGCCCATGAGAATATTGATAGGACTTTGAAGTCTGCAGAGGCCATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGCAATAAGAAGGGTTTTAAGAATGATGATGGTGTTGTCATCCGTGCCAACAATTTGATAAGCGAAGCTATTTCTAAACTAGAAGATGAATTTAAGCGGCTATTATCGTCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGGTTCTCTTCCAAACTCAATGCGACCTTCATCAGCATCACCAGGTCGTGATGGTGATCCTAATGGAAAGAATCATTCTTCTAATGTCCATTATGAGCTACATAAAAATAATGTCGATGCTCTTATATACACACCTCCTATTCTTATTCCACCAAGAATTTTGCCACTGCTCAATAATTTAACCCAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAACATACAGAGATACCCGTTCTAAAGTATTGGAAGAAAGCCTTCAAAAGCTTGGTGTTGAGAAACTCAGCAAAGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGCTGAACGGAAAGTTTGTGATCAGATATTTGAAGGATTTGACTCACTTAGTGATCAGTGTTTTGCTGAAGTAACTACAAACAGTATTTCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATTCATGCAGAGATTGAAATACTCTTTAAAGGCAGAGCTTGCACTAAAATAAGAGAAGCTGTAATGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGATCTACTTTACACCAACTTTTTCAAGGAATTGAAGGTGAAGGTGATTCTTCACAGCTAGCATCTGTGACAATGCGGATATTGCAAGCTCTTCAAACCAATTTAGATGGGAAATCAAAACAGTATAGAGACCCTGCTTTGACACATCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTAGGAGGTCTGAAGCAAAGGACTTGTTGGGGGATGATTGGATACAACGGCATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGTGGTAGTAGTAATGCTGGTGGTGATGCGGGCAGTAGTGGTGCTTCAAGAACAATGGTTAAAGACAGGTTCAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGATGCAGAGTTGCGAGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGCTACCTGCCTATAGATCATTTGTGAAACGTTTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGGTACATCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAATTTTTTGAAGGAAAAAGCATGAATGATAACAAGCGGTAA 1959 0.4094 MGMAVASDDLLSEKAAAMRASLERSQAITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKSAEAILAHFDQYYQAEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKNDDGVVIRANNLISEAISKLEDEFKRLLSSYSKPVEPERLFGSLPNSMRPSSASPGRDGDPNGKNHSSNVHYELHKNNVDALIYTPPILIPPRILPLLNNLTQQMVQAGHQQQLLKTYRDTRSKVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAAERKVCDQIFEGFDSLSDQCFAEVTTNSISMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHAEIEILFKGRACTKIREAVMGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLHQLFQGIEGEGDSSQLASVTMRILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGSSNAGGDAGSSGASRTMVKDRFKTFNTMFEELHQKQSQWTVPDAELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYIKYTAEDLERILGEFFEGKSMNDNKR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1115 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 648 IPR004140 GO:0000145|GO:0006887
Gso10g1115 652 Gene3D Exocyst complex component Exo70 75 652 - -
Gso10g1115 652 MobiDBLite consensus disorder prediction 162 192 - -
Gso10g1115 652 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 648 - -
Gso10g1115 652 Pfam Exo70 exocyst complex subunit 280 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso10g1115 652 SUPERFAMILY Cullin repeat-like 77 643 IPR016159 -
Gso10g1115 652 Coils Coil 99 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1115 Gso-Chr10 32523300 32541698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1115 3 652 EXO70 exocyst subunit family AT5G03540 70.545 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1115 K07195 - gmx:100775958 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1455 19 43435491 43437525 Gso10g1115 10 32523300 32541698 PCT
Gso3g1467 3 40659689 40662007 Gso10g1115 10 32523300 32541698 PCT