Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1114 ATGTTCATAATCATGCTTTTGTTGCTCTCTAACTTGATGATCCAACCACAAAGTGGTGCAAGCACTGTAGTTGATCCTAACACTTTCTCCTTTGTTACTTTCACTCCCGAGAGTTGCACCAATGGTGAGTTGCTTTGCATGGGTTCAGCCACCGCTGGAAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGTGGCAATTTAAGTTTATCATTGTCTAACACAACAAACAGTGTTGGAAGGGTTTTGTACCCTCATCCTGTGAAGGTTTGGCCTGCCATTATCTCCACCACATTCACTGTTAGGATCACTCCCTTTTCGGAAAATTCAACCAACGCTGGTGATGGAATGGCATTAGTGTTTGCACAAGATAATAGGCCCTCACCAAATGGCTCTTATCTTGGCATGTTTGATCAGTCTACACAAGGAGGCGGTTTTCAAAAAATAGCTCTGGAGATGGACACTTTCATGAATGAATTTGATCTAGATGGAAACCACATTGGAATAGTCACAACAAGCATAACAAATCCACTTGCATCTGAGAGTCTCAATAGCTCTGGCATTGACCTCAAAAGTGGAAGAGACATTGAGGTCAGAGTTGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACACTGAGAGCCAATTGAAGAGTGTCCTTAACCATTCAATTAACCTACCTGACATAGTTCCAAGCTCCATTTATGTAGGATTCACAGCCTCCACAGGCAACAACACTTTTCCTGAAAGCCACCAAGTCCTCAATTGGGTATTCACATCAGTGCCACTGCCTATTCTTTCTGTTGAACTCACTAAAGTTGGCACCATCAAGACCATATTGGTAGTTGTCATGGTATGCTTATTTCCTTGCATTTGGATAGCTGCTTCTTTGAGGAGAACATATGTAAGGGCTAAAAAGAAAGGGGATATAGAAAGCCTAACAAAGAAGGCTGCTGATATCCCCAAGGTGTTCACTTACAAGCAACTATCAAGGGCAACATGCAAATTCAGCCAGGAAAATCTTTTGGGAAAAGGTGCATTTGGTAGTGTTTATAGAGGCATCATATTGGACTCTGGAAAAACTGTAGCAGTAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAAGGCTGGTGCAGCGAAGGTGAGAATCTTCTCTTGGTTTATGATTACATGCAAAATGGAAGCCTTGATCACTTCATAGGCAAGGGCAGTCTGAACTGGCAAACCAGGCACAAGATATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAACGTCATGCTGGACTCTAATCACAATGCTCATTTAGGAGATTTTGGACTAGCAAGGTTACTCAAAAATGAAGGTTCAGTGACTACAAATCTAAATGGAACTCTAGGATATTTGGCTCCTGAACTAAGCTTTACCGGGAGAGCTACACCGGAATCAGATGTGTATAGCTTTGGCATGGTAGTTCTTGAAGTCATATGTGGGAAAAGGTTAAACTGGCTTAAGCAAGGGAATAGTTTTGTAGATTCCGTATGGAATTTGCATGCTCAAAATGCGTTGCTTGAGTGTGTTGACCAACGACTAGAGAACAAATTCGATGAGGAAGAAGCAAAAAGGGCATTGATGGTTGGTTTGGCTTGTTTGCATCCTGATTCCATGTTCAGGCCAAGGATGAGAAAAGCGGTGAACATTTTTCAGAGCCCAAATGAACCTTTAATGGAATTACCTGGAGTGAGGCCTACTGGAGTTTATGTATCAGTTTCTTCTAGTTCATCATCAGCCTCCAACTCTAGCTCTAGAGTGATCATTGTCTATGATTACTTACCAGCAAGGTTTTTGGAGCCTCTGCGAACGAAATTTCAGCTGCATTTGTCCACAATTTTCCAGATTATCAAAGATCGCGACGAAACCACAACCTCGAGTGTGACTGCCATTCACCACCAAGTAGTAAATTGGGGAAGATAA 2082 0.4198 MFIIMLLLLSNLMIQPQSGASTVVDPNTFSFVTFTPESCTNGELLCMGSATAGNGYLSLTPEPQQSGNLSLSLSNTTNSVGRVLYPHPVKVWPAIISTTFTVRITPFSENSTNAGDGMALVFAQDNRPSPNGSYLGMFDQSTQGGGFQKIALEMDTFMNEFDLDGNHIGIVTTSITNPLASESLNSSGIDLKSGRDIEVRVDYDGWSKMIFVSVGYTESQLKSVLNHSINLPDIVPSSIYVGFTASTGNNTFPESHQVLNWVFTSVPLPILSVELTKVGTIKTILVVVMVCLFPCIWIAASLRRTYVRAKKKGDIESLTKKAADIPKVFTYKQLSRATCKFSQENLLGKGAFGSVYRGIILDSGKTVAVKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCSEGENLLLVYDYMQNGSLDHFIGKGSLNWQTRHKILTGLASALLYLHEECGNPFVHRDVKPNNVMLDSNHNAHLGDFGLARLLKNEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVICGKRLNWLKQGNSFVDSVWNLHAQNALLECVDQRLENKFDEEEAKRALMVGLACLHPDSMFRPRMRKAVNIFQSPNEPLMELPGVRPTGVYVSVSSSSSSASNSSSRVIIVYDYLPARFLEPLRTKFQLHLSTIFQIIKDRDETTTSSVTAIHHQVVNWGR* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1114 693 ProSitePatterns Protein kinases ATP-binding region signature. 347 371 IPR017441 GO:0005524
Gso10g1114 693 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Gso10g1114 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 266 IPR013320 -
Gso10g1114 693 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Gso10g1114 693 PANTHER - 68 267 - -
Gso10g1114 693 PANTHER - 287 628 - -
Gso10g1114 693 CDD lectin_legume_LecRK_Arcelin_ConA 29 265 IPR001220 GO:0030246
Gso10g1114 693 Gene3D Phosphorylase Kinase; domain 1 300 417 - -
Gso10g1114 693 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 68 267 - -
Gso10g1114 693 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 287 628 - -
Gso10g1114 693 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1114 693 Pfam Protein kinase domain 342 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1114 693 Gene3D - 25 272 - -
Gso10g1114 693 SMART serkin_6 341 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1114 693 Gene3D Transferase(Phosphotransferase) domain 1 418 611 - -
Gso10g1114 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Gso10g1114 693 CDD STKc_IRAK 347 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1114 Gso-Chr10 32517093 32520597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1114 32 620 Receptor kinase-like Gene Family AT5G55830 38.199 1.45e-117 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso10g1114 Pkinase 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1114 - - gmx:102665030 1347.03