Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1102 ATGATCTCTCTAAACTCGTGGCATCTCCTCCACATATTTGCATGCATTCTTCTTCTGACTCAGACATATTCTAAGGATGACAGAAAGACCTACATTGTTTACATGGGTGATCATCCCAAGGGAGTCGTCCAATCCACAGAATTACTTCACATTAGTATGGTTCAAAACATCCTCGGCAGCAAATTTGCCCCAGATGCTTTGCTACATAGCTACAAGAAGAGTTTTAATGGATTTGTTGCAAAGCTAACAGAAGAGGAAGCAGCGAGAATGGCAGGATTGGATGGTGTGGTTTCGGTCTTCCAAAACAAAAAGAATAAGTTGCAAACAACAAAGTCTTGGGACTTCATAGGCTTTTCTCAGAATGTCAAAAGAACAAGTATAGAGAGCGACATAATTGTTGGAGTAATAGATTTCGGAATTTGGCCAGAGTCTGATAGTTTTAATGACAAAGGATTTGGTCCACCACCACAAAAATGGAAGGGCACTTGCCATAACTTTACCTGCAACAACAAAATAATTGGAGCAAAATATTTCCGCATGGATGGTTCATTTGGAGAAGATGACATAATATCACCCAGGGATTCAAATGGCCATGGAACTCACTGTGCATCCACTGCTGCTGGAAACTCAGTTGAGTCCACAAGCTTCTTTGGCCTTGCCTCAGGGACAGCAAGAGGAGGAGTTCCATCGGCACGAATCGCGGTGTACAAACCTTGTTGGTCATCTGGCTGCGATGATGCCGACATCCTTCAAGCATTCGATGAAGCCATCGCAGATGATGTTGACGTCATTTCCATTTCCTTGGGACCTGTGAGTGTCGATCACCGCAACTATTTTGAAGATGTGTTCGCCATTGGGGCTTTCCATGCAATGAAGAAAGGAATATTAACGTCCCATTCTGCTGGTAATGAGGGTCCAGAGCTTTCTACAATGTCTGTTTATGCTCCATGGTTACTTTCTGTGGCTGCAAGCACTACAGACAGAAAGCTTTTTACCCTTGTTCAGTTGGGTGATGGCACAGTCTATGAGGGAGTTTCAGTCAATACATTTGATCTTAAAAACGAAAGTTATCCATTAATTTATGCTGGAGATGCACCCAACATCACTGGTGGATTCAATAGATCCATATCCAGGTCATGTATCCAAAATTCTTTGGATGAGGATTTGGTAAAGGGAAAGATTGTTCTGTGTGATGGTTTGATTGGTTCTAGATCTTTGGGATTGGCTTCTGGAGCAGCCGGTATTTTACTAAGAAGTTTGGCGTCAAAAGATGTTGCAAATACATTTGCATTACCAGCCGTCCACCTTAGCTCAAACGATGGGGCACTCATACACTCTTACATAAATTTAACAGGTAATCCAACTGCCACTATATTTAAGAGTAATGAAGGCAAAGACTCGTTAGCCCCTTACATAGCTTCATTCTCATCTAGAGGTCCAAATCCAATCACTCCAAACATTCTCAAGCCTGATTTAGCTGCTCCTGGAGTTGACATTTTGGCTGCATGGTCTCCAATTAGTCCTGTTGCTGGGGTCAAAGGTGATGAGAGAAATGGAAACTACAATATAATATCAGGCACCTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGCCTATATCAAATCATTTCATCCTGATTGGTCTCCTGCAACAATCAAATCAGCATTAATGACTACTGCTACCCCAATGAGCATTGCACTTAATCCTGAAGCTGAATTTGCTTATGGTGCTGGACAAATCAACCCCATCAAAGCATTGAATCCTGGCTTAGTATATGATGCCAATGAAATTGATTATGTCAAGTTTTTGTGTGGACAAGGTTATGATACTAAAAAGCTAAGGAGTATTACAGCTGATAATAGCAGTTGTACACAAGCCAATAATGGAACAGTTTGGGATCTAAATCTCCCATCCTTTGCACTCTCCATGAACACCCCAACATTTTTTAGTCGCGTTTTCCATAGAACTGTTACCAATGTTGGATCTGCTACATCAAAATATAAAGCTAGAGTAATTGCACCTCCATCTTTGTTAAACATTATAGTGGAGCCAGAAGTTTTGTCCTTCTCATTTGTGGGTCAAAAGAAGTCCTTCACTCTTAGGATTGAAGGGAGAATTAATGTGGGTATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCACTTCACAAGTAAGGAGTCCTATTGTAGTGTACTCTGAATAA 2205 0.4145 MISLNSWHLLHIFACILLLTQTYSKDDRKTYIVYMGDHPKGVVQSTELLHISMVQNILGSKFAPDALLHSYKKSFNGFVAKLTEEEAARMAGLDGVVSVFQNKKNKLQTTKSWDFIGFSQNVKRTSIESDIIVGVIDFGIWPESDSFNDKGFGPPPQKWKGTCHNFTCNNKIIGAKYFRMDGSFGEDDIISPRDSNGHGTHCASTAAGNSVESTSFFGLASGTARGGVPSARIAVYKPCWSSGCDDADILQAFDEAIADDVDVISISLGPVSVDHRNYFEDVFAIGAFHAMKKGILTSHSAGNEGPELSTMSVYAPWLLSVAASTTDRKLFTLVQLGDGTVYEGVSVNTFDLKNESYPLIYAGDAPNITGGFNRSISRSCIQNSLDEDLVKGKIVLCDGLIGSRSLGLASGAAGILLRSLASKDVANTFALPAVHLSSNDGALIHSYINLTGNPTATIFKSNEGKDSLAPYIASFSSRGPNPITPNILKPDLAAPGVDILAAWSPISPVAGVKGDERNGNYNIISGTSMACPHVTAAAAYIKSFHPDWSPATIKSALMTTATPMSIALNPEAEFAYGAGQINPIKALNPGLVYDANEIDYVKFLCGQGYDTKKLRSITADNSSCTQANNGTVWDLNLPSFALSMNTPTFFSRVFHRTVTNVGSATSKYKARVIAPPSLLNIIVEPEVLSFSFVGQKKSFTLRIEGRINVGIVSSSLVWDDGTSQVRSPIVVYSE* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1102 734 Gene3D - 327 465 - -
Gso10g1102 734 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Gso10g1102 734 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Gso10g1102 734 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Gso10g1102 734 Pfam Peptidase inhibitor I9 30 107 IPR010259 -
Gso10g1102 734 PANTHER PUTATIVE-RELATED 19 732 - -
Gso10g1102 734 Pfam Subtilase family 129 579 IPR000209 GO:0006508|GO:0008236
Gso10g1102 734 CDD Peptidases_S8_3 106 562 IPR034197 -
Gso10g1102 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 108 IPR037045 -
Gso10g1102 734 CDD PA_subtilisin_like 334 458 - -
Gso10g1102 734 ProSitePatterns Serine proteases, subtilase family, histidine active site. 198 208 IPR022398 -
Gso10g1102 734 ProSiteProfiles Serine proteases, subtilase domain profile. 112 587 - -
Gso10g1102 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 526 536 IPR023828 -
Gso10g1102 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 732 IPR045051 -
Gso10g1102 734 Gene3D Peptidase S8/S53 domain 130 600 IPR036852 GO:0004252|GO:0006508
Gso10g1102 734 Pfam Fibronectin type-III domain 634 731 IPR041469 -
Gso10g1102 734 Gene3D - 604 733 - -
Gso10g1102 734 SUPERFAMILY Subtilisin-like 107 591 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1102 Gso-Chr10 31831880 31836942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1102 27 733 Subtilisin-like Serine Gene Family AT5G59100 49.378 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1102 - - gmx:100801111 1377.07