Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1100 ATGATTTCTCTGAGCTTGTGGCATCTCCTCCTCGTACTTTCATGTGTTCTTCTTTTGACTCAGACATATTCTGAAGATGACCAAAAGACCTACATTGTCTACATGGGTGATCATCCAAAGGGAGTAATTCAATCCGCAGAATCACTTCACATCAGTATGGTTCAAAATATCCTCGGCAGCAAATTTGCACCGGATGCTTTGCTACATAGCTACAAGAAGAGTTTTAATGGATTTGTTGTAAAGCTAACAGAAGAGGAAGCAGTGAGAATGGCAGAATTGGATGGTGTTGTTTCTGTTTTCCCAAACAAAAAGAACGAACTTCATACAACAAGGTCATGGGACTTCATAGGCTTATCTCAGAATGTCAAGAGAACAAGTATAGAGAGTGATATAATTGTTGGAGTAATAGATTCAGGAATTTGGCCGGAGTCTGATAGCTTTGATGACGAAGGATTTGGTCCACCACCACAAAAATGGAAAGGCACTTGCCATAACTTCACCTGCAACAATAAAATCATTGGAGCAAAATATTTTCGCATGGATGGTTCATATGAAAAGAATGACATCATATCTCCAAGGGATACAATTGGGCATGGAACTCACTGTGCATCCACTGCTGCTGGAAACTCAGTTATTGAGTCCACAAGTTTCTTTGGCCTTGCCTCAGGGACTGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTATACAAATCTTGTTGGTCAAGTGGTTGTGATGATGCTGACATCCTTCAAGCATTTGATGAAGCAATTGAAGATGGTGTTGATATCATTTCCATTTCACTTGGACCTAGAGAAGTTGAATATAGTGACTATTTCAATGATGTGTTCGCCATAGGGGCTTTCCATGCAATGAAGAAAGGAATACTAACCTCCATTTCTGCTGGTAATAGTGGTCCAGAGTTTTATACAATATCTAAAAATGCACCATGGTCACTTTCTGTAGCTGCTAGCACTATAGACAGAAAGTTTTTTACCCGTGTTCAATTGGGTGATGGCACAATCTATGAGGGAGTTTCAGTAAATACGTTTGATCTAAAAAATGAGAGTTATCCTTTAATTTATGGTGGAGATGCACCCAATATCACTGGTGGATACAATAGTTCCATATCGAGGTTATGCCTGCAAGATTCTTTGGATGAGGATTTGGTGAAAGGAAAGATTGTTTTGTGTGATGGTTTTCGAGGTCCTACATCTGTGGGATTGGTTTCTGGAGCAGCTGGTATTTTACTAAGAAGTTCAAGGTCAAAAGATGTGGCTTATACATTTGCATTGCCAGCAGTTCACCTTGGCCTAAATTATGGGGCACTTATACAATCTTACATAAATCTAACAAGTGATCCAACTGCCACTATATTTAAGAGTAATGAAGGCAAAGACTCATTTGCACCTTACATAGCTTCATTCTCATCTAGAGGACCAAATGCAATCACTCCAAACATTCTTAAGCCTGATTTAGCTGCTCCAGGAGTTGAAATTTTAGCAGCATGGTCAACAATTGTCCCTCCTTCTAATGTTAAAGGTGATAAGAGAATAGCAAACTATACCATACAATCTGGAACTTCAATGGCATGCCCTCATGCTACTGCGGCAGCTGCCTATATCAAATCCTTTCATCCTAATTGGTCACCTGCCGCAATCAAATCAGCATTAATGACTACTGCTACCCCAATGAGTGTTGCACTTGACCCTGAAGCCGAATTTGCTTATGGTGCGGGGCAAATTCATCCCATCAAGGCATTGAATCCTGGCTTAGTATATGATGCCAGTGAAATCGATTACGTCAACTTTCTAGGTGAACAAGGTTACGATACCAAAAAGCTAAGAAGTATTACAAATGATAATAGTAGTTGTACACAACCCAGTGATGGAATAGGTTGGGATTTAAATCTCCCATCTTTTGCTGTAGCAGTGAACACCTCAACATCTTTTAGTGGTGTTGTTTTTCATAGAACCGTTACAAATGTTGGATTTGCTACATCAACATATAAAGCTAGAGTAACTATACCTTCATCTTTTTTGAAGTTCAAAGTGGAGCCAGATGTTTTGTCCTTCTCATTTGTGGGTCAAAAGAAGTCCTTCACCCTTAGGATTGAAGGGAGGCTTAATTTTGATATAGTTTCTTCTTCTTTGATTTGGGATGATGGAACTTTTATAGTAAGGAGTCCTATTGTCATGTTTGCTGCATAA 2211 0.3962 MISLSLWHLLLVLSCVLLLTQTYSEDDQKTYIVYMGDHPKGVIQSAESLHISMVQNILGSKFAPDALLHSYKKSFNGFVVKLTEEEAVRMAELDGVVSVFPNKKNELHTTRSWDFIGLSQNVKRTSIESDIIVGVIDSGIWPESDSFDDEGFGPPPQKWKGTCHNFTCNNKIIGAKYFRMDGSYEKNDIISPRDTIGHGTHCASTAAGNSVIESTSFFGLASGTARGGVPSARIAVYKSCWSSGCDDADILQAFDEAIEDGVDIISISLGPREVEYSDYFNDVFAIGAFHAMKKGILTSISAGNSGPEFYTISKNAPWSLSVAASTIDRKFFTRVQLGDGTIYEGVSVNTFDLKNESYPLIYGGDAPNITGGYNSSISRLCLQDSLDEDLVKGKIVLCDGFRGPTSVGLVSGAAGILLRSSRSKDVAYTFALPAVHLGLNYGALIQSYINLTSDPTATIFKSNEGKDSFAPYIASFSSRGPNAITPNILKPDLAAPGVEILAAWSTIVPPSNVKGDKRIANYTIQSGTSMACPHATAAAAYIKSFHPNWSPAAIKSALMTTATPMSVALDPEAEFAYGAGQIHPIKALNPGLVYDASEIDYVNFLGEQGYDTKKLRSITNDNSSCTQPSDGIGWDLNLPSFAVAVNTSTSFSGVVFHRTVTNVGFATSTYKARVTIPSSFLKFKVEPDVLSFSFVGQKKSFTLRIEGRLNFDIVSSSLIWDDGTFIVRSPIVMFAA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1100 736 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Gso10g1100 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Gso10g1100 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Gso10g1100 736 CDD PA_subtilisin_like 335 459 - -
Gso10g1100 736 Gene3D - 328 466 - -
Gso10g1100 736 Gene3D Peptidase S8/S53 domain 130 601 IPR036852 GO:0004252|GO:0006508
Gso10g1100 736 Gene3D - 605 735 - -
Gso10g1100 736 Pfam Subtilase family 129 580 IPR000209 GO:0006508|GO:0008236
Gso10g1100 736 ProSitePatterns Serine proteases, subtilase family, histidine active site. 198 208 IPR022398 -
Gso10g1100 736 Pfam Peptidase inhibitor I9 30 108 IPR010259 -
Gso10g1100 736 PANTHER PUTATIVE-RELATED 19 734 - -
Gso10g1100 736 CDD Peptidases_S8_3 106 563 IPR034197 -
Gso10g1100 736 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Gso10g1100 736 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Gso10g1100 736 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Gso10g1100 736 SUPERFAMILY Subtilisin-like 107 592 IPR036852 GO:0004252|GO:0006508
Gso10g1100 736 ProSiteProfiles Serine proteases, subtilase domain profile. 112 588 - -
Gso10g1100 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 734 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1100 Gso-Chr10 31792396 31809831 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1100 27 735 Subtilisin-like Serine Gene Family AT5G59100 48.892 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1100 - - gmx:100800042 1446.41