Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1085 ATGGGCGTTGAGAACTACCACGTCATCGAGCTCGTCGGCGAGGGTTCCTTCGGGAAAGTATACAAGGGAAGACGCAAGCACACGGGACAGACCGTCGCGATGAAGTTCATAATGAAGCACGGGAAGACCGAGAAGGATATTCATAATTTAAGACAAGAAATCGAGATCTTACGAAAGTTAAAGCATGGAAATATTATTCAAATGCTCGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTTGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCCTTACATTATTTGCATTCCAATCGGATCATCCATCGTGATATGAAGCCCCAAAATATTCTAATTGGTGCTGGATCTATTGTCAAGCTTTGTGATTTTGGGTTTGCGCGTGCAATGTCCACAAATACAGTTGTTTTGCGATCTATAAAAGGAACTCCGTTGTACATGGCTCCAGAGCTTGTACGGGAACAACCATACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATATTGTATGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTTAAGGATCCTGTTAAATATCCAGATTGCATGAGTCCCAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTCACATGGCCGACTCTTCTTGAACATCCATTTGTTAAAGAAAGCTCTGATGAACTTGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACACATGCACAGTGATGAAGCACGGGTGGTTGAAGGGAAAACCATTCAAACTCCGACAACAGAGGAGCATATTGCTTCACTGCTTCAGAGTGCTATTCAGTTAAATAGTCCTAACTTAGACAGAGCCAATACTTCAGTGCTTGATGAGTCCCTAGGATTTTCAAATCAAAATGTAGGAGAGTCAGGTTGCCAAAGATTGAACAGACTTGAAAATAACTCTCGCACAGTCAACGGTGCAAAACTAATTGGCCAAGATAATGAAGCATTGAAACATATTCTGCTACCACTGAAAAAATGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTGAATCAAACCAGTCGTTGAGGATTCTCTCAAACCTAGTTGCAGCTGGTGCCTTCAGTTCTAGTGGACTAATAGATGAACTAATAAAAGAGCTCCTTGTGTTTACTGAATCTGTTATAGCCATGAAATCCTCTGAAGTTACTGACATGATGGCAAAGGGTTTCTCCATCACTAAAATTTTGCTAGATAATGGTGGAAGTTTCACTTCAAGCTCTTATGTAAGTCACTGGGTTGAATTTGTTGAGATCTATTCTCAGGTTGTAACTTCAAATAATGATGCATCTGGAAGAGTTCTGTATGAATCTAGTGCCTGCATTACAGTCATGCTATCTAGAGTTGCTCAGGTGCTTAGATCATCTCCTAAAATTTCAGGCCAAGAGAAACTGAATGAAACTGCTTACAGAATTTTAGAGCATTCAAAAACAACTGGTTTAGTAGACCATTTGTGTCTGTGTTTAGCCACTTCAGGATCGAGTCTTATTACAGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCATGCAAAGCTGTCTGGTCTTTGATTAATGCACTGGATATACTTTTTATGAAAAAAAGTGCCATTCTGTTTCCCATTAATGCTTTGCGGAGTCATTCTTTGCATAGGATGGAAGTTGTGCATTATGAGCAAGATCTCTTGCATAAAGCTGATTCGACTAAAGTTGTTGATGCAATGACAAGAGCATTCCTGAGATCTAAAACTGTTCTGGTTGCTGTTTACTATTGTTTTCACCAAGGACTTGAATCTGCAATGAATTGTGGTCTTCAGCTTTTATCAAGGTGCTGTCTACATAATGGAATTGTTCCTGCTCTCCTTTGTGGTCTTCCCAGTTCCCTTCCCGTGACTACTGTTGTTAGTGGTGGCGGTGATGGAACTATTGTTTCAGAAGTTTTCACTGTTTTATCATTATGCAGTTCCTCTGTTAACAAAGACACACAAAGTGTAGAACCAAGTAATGCCAAGTGCAAATTAACAAATCCTTCTGCTCTGGTTCGTCATTCATGTCTCCTTGTTGCAGTAATTGCTCAGTGTTTGAAGTCATCTGGAAGAAATTCAGCAATTTTTATGCTCACTACCTCACCAAAGAAGCAGTTTGCTCGACTATCAGTGCTTGCTCACCAAATTTCTTCTGATGATAAAATAAAAGCCTCTATTGAGCCTCAAAGTGCATCAGCCATGTTGGCTCTGGCATCCATTCTATCCCTCGAATCTGGGGCTTTGGTTGAGTCTCCAATATCTGAAATTGCTATGCCTTTAATTCCTCGAACTTCTACACTAAGTGACCATCTTAAATTTTCATCTAGCAATGTAAATGAATTGGACCCTTGCAACATCAGTGGGAAGTTCTCATATTGGCAAGGGGTAAGAGATGGGTTTGTTGGTCTTTTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAACAGTTGTGTGCAAGTGGCACTCCTCTACTTCTTATGGGCCTATTAGGCAATGATGTCTTAAATGCTTCTCATGGAAATGACCATGTAAATGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATCATTATGTCATTGTCTTTCTGGTGGTGCTTTGACTTATCGTCAAATTTTGATTAGGAATGAACATATTAAGCTCTTTTCCAACTTGATATGTGATGTTCATATGAAGTTGGTAAAATGTTGGATCGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGGAGTGATAGATCTCTTAGCATTTCCTTTTGTTGCTCTGCAAAATGCGCCTGGCTTGCCATCTGCCACTGCTTCTGTCAGCAGTGGGTTTCTTCTTAATATTGGCTCTCCTGGTCAGAGAGTATGCATGGAAGATAAGGGTATAGTTAAGGCAATTGAAGAAGACATGGGAAAATATATTAAGATTCTTGTAGAGGTGGGTGTGCCTGGTATTATCCTTCGATGCCTAGATCATATGGATTTGAATGATTTGGGCAGGCCTGTTGCCTTTATGGCTAAAATGGTATGCCACCGACCTTTAGCAATCCAACTTGTGAGTAAAGGTCTTCTGGATCCAAATAGTATGAGGAAGTTGTTTGACTGTTCGGCCCCAAAAGAGGTCAAATTGGATGCTCTTATGATTATTTCTGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTGAAAGATTTTCTTTCACACGAGGATCCCAATATGCGTGCTAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAGTGCCTATTTTTATAGTTCACTTGCAAGACATCAAATTGTTGGTATCCTTATTGAAAGATGTTCTGATCCAGACAAACGAACACGGAAATTCGCTTGTTTTGCTATTGGAAATGCGGCCTACCACAATGACTTGTTGTATGAAGAGCTGAGGAGATCGATTCCTCAACTGGCAAATTTGTTACAAATGGCAGAGGAAGATAAGACTAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAAGCTTTGTGAAGACATCGTGTGTAAAGGAGCGGTTCAGTCTCTGCTGAAACTAATTTCCGATTGTGCGGTATCAGCGCTAAATCCAAGTAGAAATGATTCAGGAAATGAATCTCCTCTAAAGATAGCTCTCTTTTCCCTAGCAAAGATGTGTGCACATCCATTGTGCAGACAGTTCATCCGTTCATCACCATTGTTCCCTGTGATTGGAAGGCTTCAGCAGTCTCCAGAATCATCCATTGCCAAATATGCTTCTGCGATCATTAGCAAAGTTGCTGAACCTTGA 3999 0.4071 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDCMSPNFKSFLKGLLNKAPESRLTWPTLLEHPFVKESSDELEARELREINGSHMHSDEARVVEGKTIQTPTTEEHIASLLQSAIQLNSPNLDRANTSVLDESLGFSNQNVGESGCQRLNRLENNSRTVNGAKLIGQDNEALKHILLPLKKWSKGSQNICSDQDVPESNQSLRILSNLVAAGAFSSSGLIDELIKELLVFTESVIAMKSSEVTDMMAKGFSITKILLDNGGSFTSSSYVSHWVEFVEIYSQVVTSNNDASGRVLYESSACITVMLSRVAQVLRSSPKISGQEKLNETAYRILEHSKTTGLVDHLCLCLATSGSSLITGSSNMLRAASEACKAVWSLINALDILFMKKSAILFPINALRSHSLHRMEVVHYEQDLLHKADSTKVVDAMTRAFLRSKTVLVAVYYCFHQGLESAMNCGLQLLSRCCLHNGIVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCSSSVNKDTQSVEPSNAKCKLTNPSALVRHSCLLVAVIAQCLKSSGRNSAIFMLTTSPKKQFARLSVLAHQISSDDKIKASIEPQSASAMLALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSSNVNELDPCNISGKFSYWQGVRDGFVGLLDSRLKWGGPLAVQQLCASGTPLLLMGLLGNDVLNASHGNDHVNDRVGLSPIGVVWTISSLCHCLSGGALTYRQILIRNEHIKLFSNLICDVHMKLVKCWIGPGGGRAGVRDLINGVIDLLAFPFVALQNAPGLPSATASVSSGFLLNIGSPGQRVCMEDKGIVKAIEEDMGKYIKILVEVGVPGIILRCLDHMDLNDLGRPVAFMAKMVCHRPLAIQLVSKGLLDPNSMRKLFDCSAPKEVKLDALMIISDLARMDKGFYEYIKGASILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLARHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPQLANLLQMAEEDKTKANAAGALSNLVRNSDKLCEDIVCKGAVQSLLKLISDCAVSALNPSRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASAIISKVAEP* 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1085 1332 Coils Coil 1200 1220 - -
Gso10g1085 1332 Coils Coil 40 60 - -
Gso10g1085 1332 Gene3D - 1032 1329 IPR011989 -
Gso10g1085 1332 PANTHER PROTEIN KINASE RELATED 1 1330 IPR045193 GO:0004674
Gso10g1085 1332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Gso10g1085 1332 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1085 1332 SUPERFAMILY ARM repeat 1025 1329 IPR016024 -
Gso10g1085 1332 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Gso10g1085 1332 CDD STKc_STK36 4 256 - -
Gso10g1085 1332 Gene3D Transferase(Phosphotransferase) domain 1 2 321 - -
Gso10g1085 1332 SMART arm_5 1236 1290 IPR000225 GO:0005515
Gso10g1085 1332 SMART arm_5 1196 1235 IPR000225 GO:0005515
Gso10g1085 1332 SMART arm_5 1112 1152 IPR000225 GO:0005515
Gso10g1085 1332 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1085 1332 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1085 1332 SUPERFAMILY Protein kinase-like (PK-like) 4 257 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1085 Gso-Chr10 30777843 30793588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1085 1 269 AGC Kinase Gene Family AT3G08720 37.906 2.15e-47 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Gso10g1085 Pkinase 4e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1085 K06228 - gmx:100792102 2587.76