Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1059 ATGGATAATCATTCATGGTGTTATCCAACTTGCGTTCAATGTCATAGAAAAACTGACATCCAAACAGGAGCATTCACATGCGGATGTGGCAAAGATAATGATCAGCCTGTTCTAAGGTATAGAGTTGAAGTAATGGTTAGCCAAAACAGTGACAGTAGCAAGTTTTTGCACTGGGACCGTGAATGTGCTGAATTGATTGGTCAAATAGCGGATGAAGTGAATAGGGTCAAGATTGAAGATGGTGATGTTGATTTGAATGCTTCTCATCAAGTACTTGATAGGTTGTTGGGTTATGTGTTTGCTTTTAAGGTCAGGATTCAATCAAAATTCAGGAATGCCATTGTTCTTAGATACTCAAATGAATTAGATTTGATCAATGTTGTGCTCAACATGCTGGCTGATACTGAGCAATCTCTGTTTGTGACAGCAGGCCATGATCCAGTTGCAGGATTCCCTTTAACGCCCAAAAAATGCCTATCATCTGATGACGTTGATGTTGAGTTAGGAAGCTCCCAGATTTCCCCAGCCCAACTATCGTCTAACAAATTAACAAGACATTTTGATAAGAGTTAA 573 0.3944 MDNHSWCYPTCVQCHRKTDIQTGAFTCGCGKDNDQPVLRYRVEVMVSQNSDSSKFLHWDRECAELIGQIADEVNRVKIEDGDVDLNASHQVLDRLLGYVFAFKVRIQSKFRNAIVLRYSNELDLINVVLNMLADTEQSLFVTAGHDPVAGFPLTPKKCLSSDDVDVELGSSQISPAQLSSNKLTRHFDKS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1059 190 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 1 68 - -
Gso10g1059 190 PANTHER REPLICATION FACTOR A 1, RFA1 1 68 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso10g1059 190 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Gso10g1059 190 Pfam Replication factor-A C terminal domain 3 109 IPR013955 -
Gso10g1059 190 Gene3D - 1 133 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1059 Gso-Chr10 29647825 29648836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1059 2 84 Core DNA Replication Machinery Family AT5G61000 29.412 2.99e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1059 - - gsj:114371605 390.578