Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1054 ATGGTTAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCACCCTATAACTGTAAAAGCTGACGTTTACAACTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTCGGCTTACAAGGATGTTGCTGCCAAATGCAAGGTTAGTTGGCTTCTATTTAGCATAGTTATTTTTCCTGTTAACCCTGATAAGATTTTGCAATTATTGCTTCTTTATGAATTTGATCATCTTCTTGTTGCACTTGTTCTCAACCCACAACTGAGGAATCAATATCTCCAAACCTATGTAAGAAAAATTCAATTATTTGGAACAATGTATAAGAGAAAGCTTAATGATGGAACCCTTGTGGCTATAAAGCATGTCAAGAAGGATTTACAAAACAAAAACTTGGCTGAGTTCAAGAATGAAATAAACACCTTGTCGAAAATTTGA 489 0.364 MVRGTRGYLAPEWVSNHPITVKADVYNYGMLLLEIIGGRRNLDMSFGAEDFFYPGSAYKDVAAKCKVSWLLFSIVIFPVNPDKILQLLLLYEFDHLLVALVLNPQLRNQYLQTYVRKIQLFGTMYKRKLNDGTLVAIKHVKKDLQNKNLAEFKNEINTLSKI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1054 162 SUPERFAMILY Protein kinase-like (PK-like) 2 110 IPR011009 -
Gso10g1054 162 Gene3D Transferase(Phosphotransferase) domain 1 1 67 - -
Gso10g1054 162 PANTHER OS07G0415500 PROTEIN 1 63 - -
Gso10g1054 162 SUPERFAMILY Protein kinase-like (PK-like) 121 162 IPR011009 -
Gso10g1054 162 Gene3D Phosphorylase Kinase; domain 1 105 162 - -
Gso10g1054 162 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1054 162 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1054 Gso-Chr10 29344128 29350132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1054 2 42 Receptor kinase-like Gene Family AT5G20050 65.854 1.86e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso10g1054 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1054 - - gmx:106794820 327.791