Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1045 ATGGCAATTTCTTCGGCAACAGCTTCCTCCAAACTCATATTATTCCCCTGTGCATCATCTTCTTCTTCATCATCATCCTCTTCCCTTAACTCCACACCCTTCCTCTCCTCCACCACCAACACCCACAAACTAACCCCTCTCTCCTCCTCCTTCCTCCACCGCACCCCTTCTTCCACCACCATCCCACGCCGCACTTTCACCGTCCGCAGCAAATTCGAGCGCAAGAAGCCCCACGTGAGCATCGGCACCATCGGCCATGTGGACCATGGCAAGACCATCCTTACCGCCACCCTGACCATGGACCTTGCCACCCTCAGCAATAACGCCCCCAAAAAATACGATGAGATCGTCGCCGCCCCGGAGGAGCGCGCCCGCGGCATCACCATCAACACCGCCACCGTGGAGTACGAGATGGAGAACCACCACTACGGCCACGCGGACTATGTTAAAAACATGATCACTGGCGCCGCCCAGATGGACGGCGCCATATTAGTCGTCTCCGATGCCGACGGCCCCATGCCCCAAACCAAAGAACACATCCTCTTAGCCAAACAAGTCGGTGTCCCCAACATGGCTGTGTTCTTAAACAAACAAGACCAAGTCGACGACGAAGAGCTTCTCCAACTCGTCGAGCTCGAAGTCCAAGACCTTCTGAGCTCCTACGAATTCCCCGCTGACGAATACCCCCATTGTCGCGGTTCCGTGTGA 708 0.5593 MAISSATASSKLILFPCASSSSSSSSSSLNSTPFLSSTTNTHKLTPLSSSFLHRTPSSTTIPRRTFTVRSKFERKKPHVSIGTIGHVDHGKTILTATLTMDLATLSNNAPKKYDEIVAAPEERARGITINTATVEYEMENHHYGHADYVKNMITGAAQMDGAILVVSDADGPMPQTKEHILLAKQVGVPNMAVFLNKQDQVDDEELLQLVELEVQDLLSSYEFPADEYPHCRGSV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1045 235 Pfam Elongation factor Tu GTP binding domain 76 230 IPR000795 GO:0003924|GO:0005525
Gso10g1045 235 PRINTS GTP-binding elongation factor signature 80 93 IPR000795 GO:0003924|GO:0005525
Gso10g1045 235 PRINTS GTP-binding elongation factor signature 154 165 IPR000795 GO:0003924|GO:0005525
Gso10g1045 235 PRINTS GTP-binding elongation factor signature 191 200 IPR000795 GO:0003924|GO:0005525
Gso10g1045 235 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 76 235 IPR000795 GO:0003924|GO:0005525
Gso10g1045 235 Gene3D - 68 235 IPR027417 -
Gso10g1045 235 PANTHER ELONGATION FACTOR TU, CHLOROPLASTIC 36 234 - -
Gso10g1045 235 PANTHER ELONGATION FACTOR TU-RELATED 36 234 - -
Gso10g1045 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1045 Gso-Chr10 28544626 28545333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1045 19 223 Eukaryotic Initiation Factors Gene Family AT5G10630 29.707 8.01e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1045 K02358 - gmx:100798832 402.519