Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1031 ATGGGCAAAGGAAACCCATGCCCCCGAGCTTACTATCGATGCACTGCTTCTCCATCTTGTCCAGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATTACCACCTATGAAGGAACTCACAATAACCCGCTTCCTATGTCAGCCACTGCAATGGCCTGCAAAACTTTTGCTACAGCTTCCATGCTCCAATCTCCCTCATTGAGTTCACAACATGGATTAGTTGATTCAGCTATATCCTCCATCATCAACTCTAGTGCTCCTTATTACAACCCTAATAATGCTCTAAACTTCTCTACACACCAAGTTTCAAGACGACAACAATTCTACTTCCCCAACTCATCCATTTCAACCTTGAATTCTCACCCCACAATCACTTTAGACCTTACAACACCTCCAACTTCTTCCTCAAATTCAAGCTTCACTTGCATGCCAAAATATTCATCAACAAACCTTAACTTTTCCTCAGGTTTCTCTCCTCTACATTCTAGCATGCCGCAATCACCTTGGAACAGGTATAGTGGTTACTCCAACTCTGGAACACTTTATCAAAATAGACACCAAGGTGGTAATTACATGTTAAACACGGGAAATCAAAATCAGCCACATTCTGTAGGGCATCTCCATCAACCTATTTACATGAGCAACAATAGTACCATTTCTCAGCATTCTTTCCCTAATCCCATTGTTGCTGCAACTGAGGCAATAATCAGAAGCAACCCAAAATTTCAATCAGCACTAGCAACTGCTCTCACAACATATGTTGGCAATGAAGCTAGTAGTGGTAGGACAAGAGAAAATCATGTTCTTGAGAGTGCAGAACTGATGAAGTTAAAGCTGCTACGTAGTGAAAATAGTATAGGAAACTCAAGTATATTTCCACTACCACTACCGGAGCAAAGGAAGTGA 918 0.4139 MGKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNNPLPMSATAMACKTFATASMLQSPSLSSQHGLVDSAISSIINSSAPYYNPNNALNFSTHQVSRRQQFYFPNSSISTLNSHPTITLDLTTPPTSSSNSSFTCMPKYSSTNLNFSSGFSPLHSSMPQSPWNRYSGYSNSGTLYQNRHQGGNYMLNTGNQNQPHSVGHLHQPIYMSNNSTISQHSFPNPIVAATEAIIRSNPKFQSALATALTTYVGNEASSGRTRENHVLESAELMKLKLLRSENSIGNSSIFPLPLPEQRK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1031 305 ProSiteProfiles WRKY domain profile. 1 49 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1031 305 SMART WRKY_cls 3 48 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1031 305 Gene3D WRKY domain 1 50 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1031 305 PANTHER WRKY TRANSCRIPTION FACTOR 72B 1 305 - -
Gso10g1031 305 SUPERFAMILY WRKY DNA-binding domain 3 49 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g1031 305 Pfam WRKY DNA -binding domain 3 45 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g1031 305 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 305 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1031 Gso-Chr10 27242532 27244314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1031 1 261 WRKY Transcription Factor Family AT1G18860 40.203 5.54e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g1031 WRKY 8.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1031 - - gsj:114371585 587.8