Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1022 ATGGTGACTCCAAACAATGTTACTTTGTGGGGTTTAGTTCCATATTTCTCTTTCTTGTTTGTTCAACTTGACTGCAGAGGTGTGAGAGTCATTGCATCTTCAGCAAATGTGTCAAGCATTTATACTGCTGGTGTAGATGGGATGGTATGTGTGATAGATTTCATGACAGGAAACCTGTTGGAGAAATTTAAAGCTTCTACAAAGCCAGTATCCTGCATGTCTGTTTCTCCAGATGGGAACACATTAGCTACTGCAGCAGCACAATTGAAGATTTTTAACTGTTCTAATCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGATCTGTTCGATGCATGCTTTTCACTGAAGAGGGGAAGTATGTCCTCTCGTCTGCTATTGGAGAAAGATATGTTGCTGTTTGGAGGATAGAAGGTGCTAAAAAGCAGTCAGCTAGTTGTGTTCTTGCGATGGAGCACCCTGCTGTCTTTCTTGATAGCAGGTGCATTGATAGTGGGGAACATGATGAGGTTGGCATATGTGTTTTGGCAATCTCAGAAATTGCCATTTGTTATTTATGGTTTGGTAATAGTATCGAAGAACTGCATAATACAAAACCCACAAAAATATCCTTATCTTTAGAAGACATGCCCTCAAGAAATTACAAGGGAGCTCTGCCAGCAATATATGCTGCAAAATTACAAGGCATCCAGAAGCCAGCCTCTGGGCAAGTTTTTCTTGTTTATGGGTTGCTTGTAAAACCATCATTTAGAAAAATTCTAGTGCATTCTGGTGCGGACATAAAATTGAATGTCTCTCATGATGGTGTTCTTCTTCCAATGAGTCAATCTCTTGTCAAATATAAGAAGGGGACAAATGCTCAAACAGCTACTGCACTAGACCGAGCTAATGCTGAGGATGCCTTGCTTCCAATTCCTAAGGTTTTTTATTCTCATGAGAAAGAGAAAGCATTTCAAAACTCTCTGGGCAAGGATGTAATTGATGATTTCCATAGAAGTAGTAAAGATGATTCTGTTGAGATAGAAGGTATCGATATGATTTTTTCTTGA 1050 0.3933 MVTPNNVTLWGLVPYFSFLFVQLDCRGVRVIASSANVSSIYTAGVDGMVCVIDFMTGNLLEKFKASTKPVSCMSVSPDGNTLATAAAQLKIFNCSNHKKIQKFSGHPGSVRCMLFTEEGKYVLSSAIGERYVAVWRIEGAKKQSASCVLAMEHPAVFLDSRCIDSGEHDEVGICVLAISEIAICYLWFGNSIEELHNTKPTKISLSLEDMPSRNYKGALPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKILVHSGADIKLNVSHDGVLLPMSQSLVKYKKGTNAQTATALDRANAEDALLPIPKVFYSHEKEKAFQNSLGKDVIDDFHRSSKDDSVEIEGIDMIFS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1022 349 Gene3D - 16 192 IPR015943 GO:0005515
Gso10g1022 349 SUPERFAMILY WD40 repeat-like 24 142 IPR036322 GO:0005515
Gso10g1022 349 PANTHER OS03G0300300 PROTEIN 24 339 - -
Gso10g1022 349 PANTHER OS03G0300300 PROTEIN 24 339 - -
Gso10g1022 349 SMART WD40_4 15 53 IPR001680 GO:0005515
Gso10g1022 349 SMART WD40_4 96 136 IPR001680 GO:0005515
Gso10g1022 349 SMART WD40_4 56 93 IPR001680 GO:0005515
Gso10g1022 349 Pfam WD domain, G-beta repeat 99 135 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1022 Gso-Chr10 26723133 26725104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1022 28 138 U-box Gene Family AT2G33340 27.826 5.79e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1022 K14546 - gmx:100815458 609.757