Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1018 ATGAAGAACTCAGCTTCAGAGAGCGGTTTGTACATAATTGAGAGCGATGAAGATGTGGAGAAGGATATGCAGAAAGACGAAAACGATGGAAACGATTCGGATTATTCGAATGATTCCAATGGAAACCTGTCAATGAGGAAACCCAGCAATTACAGCATCGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTGCCATCACCAAATATTGGGTTTCTGGGCACCACATCACTGTCAAGATTAAGCAGTTCTTTTATTTCTTCATCTTTGACAAGAAGGCACACTCTTGAAGTATTACAACCAGAGAAAAAACCACTCTTGCAACCCACAGAAGAGGAGCAACCGCGACATACCTTGCTTCCTCCCCAAATATCTAGGAAGTCTTCCATTAAGATTTCCAAGGTTTCTCATGAACCTCACATTCCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGCATTGGAATCCTTTCAACCCCTTATGCAGCTAAAGAAGGTGGATGGATTGGTCTTTCTATATTGTTATTGTATGCAGTTTTTTCCTTTTATACCGGGTTGCTCTTGCGTTACTGCTTGGATAGTGCACCGGGTCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTACTGGACGTGTCATCATCTCGATAATCTTATACATGGAATTATATGCTTGCTGCATTGAGTACATAATTGTGGAGAGCGACAACTTATCTACATTATTTCCAAATGCGCACATTAGTTTGGGTGGAGTTGAACTCAATGCACACATTTTGTTTGCAATATTGACCGCAGTGGCTCTTCTCCCTACTGTTTGGCTACGTGACCTACGCATTCTCAGTTACATCTCAGCTTGCGGAGTTATTGCAACGATTCTAGTGGTTCTCTGCTTGTTCTGGGTTGGTTTGTTAGACAATGCTGATATTCATACCCAAGGAACAACAAAAACATTCAATTTGGCAACTTTTCCTGTTGCAATAGGTCTCTATGGTTACTGCTATGCAGGGCATGCTGTGTTTCCAAACATCTATACTGCCATGGCAAATCGGAATCAATTCCCTGGAGTGCTCTTAGTATGTTTTGCTATTTGTACAAGTATGTATTGTGCAGTGGCTATTATGGGTTACACAGCGTTTGGAAAAGCAACACTCTCTCAGTATACTCTTAACATGCCCCAACACTTGGTGGCCACCAAGATAGCTGTGTGGACTACGGTGGTTAATCCATTTACCAAATATGCATTGAGTCTATCTCCAGTAGCAATGTGTCTAGAGGAGTTGATACCAGCCAACAGTCCCAACTTTTTCATATATTCCAAGCTCATCAGAACAGCTCTAGTAGTTTCTACACTGCTTGTTGGTCTCTCAGTTCCCTTTTTCGGTTTGGTGATGTCATTAACTGGATCTTTGCTCACAATGTTTGTGTCCTTGATTCTTCCCGCTGCTTGTTTCTTAAGCATAAGGGGTGGCAGAATCACGCGCTTTCAGGTATCAATTTGTGTTACAATTATTGTAGTAGGCATTGTTTCAAGTTGTTTGGGATCATACTCAGCCCTCTCCGAGATCATTCAAGAATTGTTTAAATCCTAG 1629 0.4199 MKNSASESGLYIIESDEDVEKDMQKDENDGNDSDYSNDSNGNLSMRKPSNYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLSSSFISSSLTRRHTLEVLQPEKKPLLQPTEEEQPRHTLLPPQISRKSSIKISKVSHEPHIPGQCTFGQAVLNGINALCGIGILSTPYAAKEGGWIGLSILLLYAVFSFYTGLLLRYCLDSAPGLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSTLFPNAHISLGGVELNAHILFAILTAVALLPTVWLRDLRILSYISACGVIATILVVLCLFWVGLLDNADIHTQGTTKTFNLATFPVAIGLYGYCYAGHAVFPNIYTAMANRNQFPGVLLVCFAICTSMYCAVAIMGYTAFGKATLSQYTLNMPQHLVATKIAVWTTVVNPFTKYALSLSPVAMCLEELIPANSPNFFIYSKLIRTALVVSTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRITRFQVSICVTIIVVGIVSSCLGSYSALSEIIQELFKS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1018 542 MobiDBLite consensus disorder prediction 14 32 - -
Gso10g1018 542 Pfam Transmembrane amino acid transporter protein 149 529 IPR013057 -
Gso10g1018 542 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 23 539 - -
Gso10g1018 542 MobiDBLite consensus disorder prediction 1 44 - -
Gso10g1018 542 PANTHER OS05G0424000 PROTEIN-RELATED 23 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1018 Gso-Chr10 26455692 26483447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1018 1 474 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.580 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1018 K15015 - gmx:100781123 1015.76