Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0988 ATGTCCTATAACGCATTATCACGGAAGGAAGGCTTAGCTGAGGCTTCATCTTGGTTCAAGGCTCCTCAGAAGCACCAGAAATATGTTTCTTATGTTCTTGGCCTTCCCATGTCAAAGGTAGTTTGCAAAACAAAACGAGTTGGTGGTGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTATTGCTGCTGCTGCTTCAGTTCCATCTTATCTTTTAAATCGACTAGTGAAAATCACGCTGGACCGAGATGTGGACATGATGATAACTGGGCAACGGCATAGTTTTCTAGGGAAGTACAAGGATACTAGCTCAACTTTGTTTGTAAAGGTCAGAGCAAATGGGTCATGGACTTCAGAAGGCCAAGCAGAAGGGTCTAATAGCTCCTCTGATGGAATGGGAAGTGCAAAGGAGAAGCCTGTGATTATTCCTACTGTTCTCATCATGGTAGTTCTCATTGTTTTGCTGAGTTTATTACTGCTTCTCGTTTATGAGTTCATGAAAAATGGATCCTTGGATAAATGGATCTTCCCTTCATATCAAGGTCGAGATAGATTGTTAGATTGGACAACTCGTTCAAATATAGCCATAGCTATTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGGATCGGATAATACATTGTGACATCAAACTGCAAAATATATTGGTAGACGAAAACTTTTGTCCCAAAGTATCTAATTTTGGGCTGGCCAAATTGATAAGAAGGGAGCACTCTCATGTGGTGACAATGGTCAGAGGCGCTAAAGGTTATTTGGCACCACAATGGGTTAGTAATCACCCTATAATTGTAAAAGCTGACGTTTACAACTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTCAGCTTACAAGGAGATGACAAATGGGTCAATAATTAAGGTGGCAGATAGGAGATGA 975 0.4154 MSYNALSRKEGLAEASSWFKAPQKHQKYVSYVLGLPMSKVVCKTKRVGGGFGGKETRSAFIAAAASVPSYLLNRLVKITLDRDVDMMITGQRHSFLGKYKDTSSTLFVKVRANGSWTSEGQAEGSNSSSDGMGSAKEKPVIIPTVLIMVVLIVLLSLLLLLVYEFMKNGSLDKWIFPSYQGRDRLLDWTTRSNIAIAIAQGIAYFHEQCRDRIIHCDIKLQNILVDENFCPKVSNFGLAKLIRREHSHVVTMVRGAKGYLAPQWVSNHPIIVKADVYNYGMLLLEIIGGRRNLDMSFGAEDFFYPGSAYKEMTNGSIIKVADRR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0988 324 SUPERFAMILY Molybdenum cofactor-binding domain 16 100 IPR037165 GO:0016491
Gso10g0988 324 SUPERFAMILY Protein kinase-like (PK-like) 158 296 IPR011009 -
Gso10g0988 324 ProSiteProfiles Protein kinase domain profile. 41 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0988 324 Pfam Molybdopterin cofactor-binding domain 18 100 IPR008274 GO:0016491
Gso10g0988 324 PANTHER OS07G0415500 PROTEIN 94 160 - -
Gso10g0988 324 PANTHER OS07G0415500 PROTEIN 160 324 - -
Gso10g0988 324 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 160 324 - -
Gso10g0988 324 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 94 160 - -
Gso10g0988 324 Pfam Protein kinase domain 159 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0988 324 Gene3D Transferase(Phosphotransferase) domain 1 166 323 - -
Gso10g0988 324 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 20 89 - -
Gso10g0988 324 Gene3D Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 90 100 - -
Gso10g0988 324 SMART serkin_6 90 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0988 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0988 Gso-Chr10 25157561 25160036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0988 160 324 Receptor kinase-like Gene Family AT5G20050 43.678 2.60e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso10g0988 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0988 - - gmx:102670544 601.668