Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0984 ATGGAACCAGATCAGCACCCTAAGATCTACCGAATGAAGCTCTGGTCCATCAATAAGGTTCGCGCCAAGTCCAAGTTCTGGTATTTTCTGAGGAAATTGAAAAAGGTGAAGAAGAGCAATGACCAAGTGTTTATTATCAACAAGGATTTTTGTAATAAGGTTGGAAATGTCTTGAGGCAAAGTGTTGCTTTCAGCACAAAAGCACTTGTTTCATCCATGCTTAATTACATTCGCTGCATGTTTTCAAGCAAGCTTTTCATTGGAGGCCTTTCATATGGAGTTGATGATCAGTCTCTTAAGGATGTATTTTCTGACTTTGGAGATATGGTTGATAGTAAATTTGGCTCACTTTCATTGCTGTTACATGGTGTCCTATTTCAACCACCCGCCAGCCTCACTTTACCATATGTTCTTCAGTTTCCTTTGTTGTCATTATAA 438 0.3904 MEPDQHPKIYRMKLWSINKVRAKSKFWYFLRKLKKVKKSNDQVFIINKDFCNKVGNVLRQSVAFSTKALVSSMLNYIRCMFSSKLFIGGLSYGVDDQSLKDVFSDFGDMVDSKFGSLSLLLHGVLFQPPASLTLPYVLQFPLLSL* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0984 145 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 4 48 IPR023573 GO:0003735|GO:0005840|GO:0006412
Gso10g0984 145 PANTHER 60S RIBOSOMAL PROTEIN L18A 1 135 IPR028877 -
Gso10g0984 145 Gene3D - 1 53 - -
Gso10g0984 145 Gene3D - 77 118 IPR012677 -
Gso10g0984 145 SUPERFAMILY RNA-binding domain, RBD 83 113 IPR035979 GO:0003676
Gso10g0984 145 Hamap 50S ribosomal protein L18Ae [rpl18a]. 1 46 IPR028877 -
Gso10g0984 145 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 85 112 IPR000504 GO:0003723
Gso10g0984 145 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0984 Gso-Chr10 24945619 24947256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0984 2 50 Cytoplasmic Ribosomal Protein Gene Family AT3G14600 73.469 4.87e-19 77.0