Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0965 ATGAATTATCTTCATCAAATGAGACCTCCTATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGATTTTGGCCTTTCACGTACAAAGGCAAACACATTTCTTTCATCTAAAACCGCTGCCGGAACTCCTGAATGGATGGCACCCGAAGTCATCCGAGGAGAACTGTCAAATGAAAAATGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACAATTAAATCCTTCACAGGTTGTTGCAGCTGTCGGTTTTATGGGCAAAAGGCTAGAGATTCCAAGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTTTGCTGGGCCACGGAACCCTGGAGACGGCCTTCTTTCTCCTATGTTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAAAGGGTGA 462 0.4264 MNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPRHVNPQVAALIELCWATEPWRRPSFSYVMKCLQQIIADAKG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0965 153 SMART serkin_6 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0965 153 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 151 - -
Gso10g0965 153 Gene3D Transferase(Phosphotransferase) domain 1 1 152 - -
Gso10g0965 153 PRINTS Tyrosine kinase catalytic domain signature 5 23 IPR001245 GO:0004672|GO:0006468
Gso10g0965 153 PRINTS Tyrosine kinase catalytic domain signature 52 62 IPR001245 GO:0004672|GO:0006468
Gso10g0965 153 PRINTS Tyrosine kinase catalytic domain signature 71 93 IPR001245 GO:0004672|GO:0006468
Gso10g0965 153 PRINTS Tyrosine kinase catalytic domain signature 115 137 IPR001245 GO:0004672|GO:0006468
Gso10g0965 153 SUPERFAMILY Protein kinase-like (PK-like) 1 144 IPR011009 -
Gso10g0965 153 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 151 - -
Gso10g0965 153 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0965 153 Pfam Protein tyrosine and serine/threonine kinase 1 144 IPR001245 GO:0004672|GO:0006468
Gso10g0965 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 11 23 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0965 Gso-Chr10 23640373 23651122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0965 1 151 MAP Kinase Kinase Kinase AT5G03730 76.159 7.21e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gso10g0965 PK_Tyr_Ser-Thr 9.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0965 K14510 - gsj:114370482 318.931