Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0943 ATGGGAATCTGCCATGGAAAACCCATTGAAACCCAACAAAGTCAAAGAGAGACCAACACCCCATCAGAATTCCCAAGTGAACTCCAAACTCCCACAAAAACCCCCAAATCCTCATCAAAATTCCCATTCTACAGCCCAAGCCCCCTTCCCAGCTGGTTCAAAAACTCCCCTTCCTCAAACTCAAACCCTAGCAGCGTCAGCTCAACACCCTTGCGGATCTTCAAGCGCCCCTTCCCTCCGCCCTCTCCGGCCAAGCACATTCGCGCGCTGCTCGCCCGCCGCCACGGTTCCGTCAAGCCGAACGAAGCCTCCATACCGGAGGCCAGCGAGTGTGAGCTCGGCCTCGACAAGAGCTTTGGCTTTGCTAAGCAGTTTTCGGCTCATTATGAGCTCAGTGACGAAGTCGGCCGGGGGCATTTTGGGTATACCTGCTCCGCTAAAGGCAAGAAAGGGGCGTTCAAGGGCTTAAATGTTGCTGTCAAAGTCATTCCTAAAGCCAAGATGACCACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATATTGAGGGCTTTAACAGGACATAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTGTGCAAAGGAGGGGAATTGCTAGATAGGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGATGCCAGAGTAGTTATGATCCAAATATTGAGTGTGGTAGCTTTTTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTTTTCACTTCTAAGGATGACAAGTCCACGCTGAAGGCCATTGATTTTGGGTTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTGGGAAGTGCTTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAGGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGCGGAAGCCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCTGTACTGAAGGCAGATCCAAGTTTTGATGAGGCTCCTTGGCCTTCTTTATCGGTTGATGCCAAAGATTTTGTAAAGAGGTTGTTGAATAAGGATTATCGTAAAAGATTGACTGCGGCTCAGGCACTAAGTCATCCATGGCTGGTGAATCATCATGATGATATGAGGATACCTTTGGATATGATAATCCACAAGCTTGTTAAAGCTTACATTTGCTCGTCTTCGTTGCGCAAATCTGCTTTACGGGCTCTTGCAAAGACATTAACAGTAGCTCAGCTAGCTTATCTCAGAGATCAATTTACTCTGTTAGGGCCAAACAAAAGTGGATTAATTTCTATGCAGAACTTTAAGACGGCTGTTTTGAGGAGCTCTACAGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTCAGTATGGTTAGTTCTATCCAATATAGGAAATTAGATTTTGAGGAGTTTTGTGCTGCTGCTATAAGTGTGCACCAACTCGAGGGAATGGAGACCTGGGAGCAACATGCAAGGCATGCCTATGAGCTTTTTAAAAAGGAAGGAAATAGACCAATTATGATTGAAGAACTTGCCTCGGAACTTGGGCTTAGTCCATCAGTACCTGTTCATGTAGTACTTCAGGATTGGATAAGGCACTCAGATGGAAAGCTTAGTTTCTTGGGATTTGTCAGGCTTCTGCATGGGGTTTCTTCCCGCGCATTTCAGAAGGCTTGA 1752 0.4543 MGICHGKPIETQQSQRETNTPSEFPSELQTPTKTPKSSSKFPFYSPSPLPSWFKNSPSSNSNPSSVSSTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEASECELGLDKSFGFAKQFSAHYELSDEVGRGHFGYTCSAKGKKGAFKGLNVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRILSRGGKYSEEDARVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDDKSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSVDAKDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDMRIPLDMIIHKLVKAYICSSSLRKSALRALAKTLTVAQLAYLRDQFTLLGPNKSGLISMQNFKTAVLRSSTDASKDSRVLDYVSMVSSIQYRKLDFEEFCAAAISVHQLEGMETWEQHARHAYELFKKEGNRPIMIEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRAFQKA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0943 583 MobiDBLite consensus disorder prediction 8 71 - -
Gso10g0943 583 Gene3D - 412 574 - -
Gso10g0943 583 Pfam Protein kinase domain 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0943 583 ProSiteProfiles Protein kinase domain profile. 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0943 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 578 - -
Gso10g0943 583 PANTHER CDPK-RELATED KINASE 1 29 578 - -
Gso10g0943 583 MobiDBLite consensus disorder prediction 1 73 - -
Gso10g0943 583 SUPERFAMILY Protein kinase-like (PK-like) 121 425 IPR011009 -
Gso10g0943 583 ProSitePatterns Protein kinases ATP-binding region signature. 135 161 IPR017441 GO:0005524
Gso10g0943 583 Gene3D Transferase(Phosphotransferase) domain 1 219 411 - -
Gso10g0943 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Gso10g0943 583 SUPERFAMILY EF-hand 420 574 IPR011992 -
Gso10g0943 583 SMART serkin_6 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0943 583 Gene3D Phosphorylase Kinase; domain 1 122 218 - -
Gso10g0943 583 CDD STKc_CAMK 128 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0943 Gso-Chr10 21634733 21660946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0943 1 581 EF-hand Containing Proteins AT3G50530 67.195 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso10g0943 Pkinase 6.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0943 - - gmx:100796678 1118.22