Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0922 ATGATATTTCAATCGTGTTTTATGATGACTGCAACTCTGCTATTATTTGTTATAGCACAATGTGTTGTGGGAGTTAATTCACTTTCACAAGCTGATAAGATAAGCACTTTGCCAGGGCAGCCACCAGTCAAATTCCAGCAATATGCTGGTTACATTACAGTGGACGACAAGCAGAAGAGAGCCTTGTTTTACTACTTTGTTGAAGCTGAAGTGGAACCAGCTTCAAAGCCACTAGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAATGGTCTTTTGAAGAATGAACATAGTTGGAACAAAGAGGCAAATATGTTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGACTTTGTGAATGATGAAATGACAGCAAGGGACAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCAGAGTTAAAAAACAATGATTTCTTTATCACAGGGGAGAGCTATGCAGGTCATTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGGATAGCAATAGGGAATCCTCTTGTCGAATTCAACACGGATTTCAACTCCAGAGCTGAGTTTTTCTGGTCCCATGGACTAATATCAGATTCAACTTACGAAATCTTCACCAAAGTATGCAACTATTCCCAAATTAGGAGACAACATCAGGGTGGGACGCTTACCCCCATTTGTTCCGGAGTAAATAGGCTAGTGTCAACGGAAGTTAGTAGGTATATTGATACATATGATGTTACACTTGATGTGTGTCTTTCATCAGCAGATCAACAGGCTTATGTGCCGAATCAACTGACTCAACTGCAAGAGGGTGCCAAGATAGATGTTTGTGTGGAAGATGAAACTATCGCATATTTGAATAGGAAAGATGTGCAGGAAGCTCTCCATGCTAAGCTCGTAGGGATCACGTCATGGTCAACTTGCAGCGATGTTCTTAAATATGACATGCAGAATCTAGAGATTCCAACCATTTCTATTCTAGGTGCACTTGCTAAGTCAGGTATCAGGGTTCTGGTATACAGTGGAGATCAAGATTCAGTCATCCCATTAACTGGGACAAGATCCCTGGTAAATGGATTAGCCAAGGACTTTGGACTCAACACAACAGTGTCCTATAGAGCATGGTTTGAGGGAAGACAGGTGGCCGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCCACCATAAGAGGAGCTGCTCATGAAGCTCCATTTTCCCAACCAGAGAGGTCACTGGTGCTGCTAAAAGCATTTTTGGAAGGAAAGCCACTTCCAGAACCATTCCTTTAA 1395 0.4201 MIFQSCFMMTATLLLFVIAQCVVGVNSLSQADKISTLPGQPPVKFQQYAGYITVDDKQKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLLKNEHSWNKEANMLYLESPAGVGFSYSANKSFYDFVNDEMTARDNLVFLQRWFTKFPELKNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLVEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQGGTLTPICSGVNRLVSTEVSRYIDTYDVTLDVCLSSADQQAYVPNQLTQLQEGAKIDVCVEDETIAYLNRKDVQEALHAKLVGITSWSTCSDVLKYDMQNLEIPTISILGALAKSGIRVLVYSGDQDSVIPLTGTRSLVNGLAKDFGLNTTVSYRAWFEGRQVAGWTQVYGDILSFATIRGAAHEAPFSQPERSLVLLKAFLEGKPLPEPFL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0922 464 Gene3D - 358 456 - -
Gso10g0922 464 Pfam Serine carboxypeptidase 38 456 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 Gene3D - 311 346 - -
Gso10g0922 464 SUPERFAMILY alpha/beta-Hydrolases 36 460 IPR029058 -
Gso10g0922 464 PANTHER CARBOXYPEPTIDASE 21 462 - -
Gso10g0922 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 462 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Gso10g0922 464 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Gso10g0922 464 Gene3D alpha/beta hydrolase 29 286 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0922 Gso-Chr10 19740958 19744895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0922 319 459 Calmodulin-binding Proteins AT2G22960 29.078 3.39e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0922 K16297 - gmx:100805028 934.865