Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0914 ATGGGAAAGCCCGGAGAACACCACCCTCTGCCCTCCTACTCCGCCGCCGAGGATCAGCGGCGGAATGCGGCGCCTCCGCCGGGATGCGCCGTCGGACTCCGATGCCTTGTCGTCATGCTTTTCTCGGTCGCGGTTTTCCTCTCCCCACTCTTCTGGCTACCACCTTTCGCTCACTTCGCAGATCCCAAGGATCTGCATTTAGATTCTAAGTACAAAGATCATGATATTGTTGCAAGCTTTTATGTGCAGAAGCCAGTTTCATTGCTAGAAGACAACATCTTGCTACTTTCTAAGGACATTTTTGAAGAGATAGGGGTTCCCTCTACCAAAGTGGTCATCTTGTCCCTAGATCCCTTACCACGGTCAAACACGACAAAAGTGGTGTTTGCAGTTGATCCTGATGGTAAATATTCAGAAATGTCTGCAGCTGCCATTAGTTTGATAAGAGCATCATTTAAATACCTGGTTATACGCCAATCATATCTCCAGCTCACTACATCCTTGTTTGGTGTTCCCTCTGTTTTTGAGGTGCTGAAATTTAAAGGAGGGATCACTATCATTCCACAACAGAGTGTGTTCCCTCTGCAAACGGTGCAAACGTTATTCAACTTTACTTTGAATTTTTCCATTTATGAAATACAATCAATTTTTGATGAGCTGACAAGTCAGCTGAAGTCTGGACTACATTTGGCACCTTATGAGAACTTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTTACTGCTCCTACTGTTGTTCAATCATCTGTCCTACTTGCAGTTGGGATTCCACCATCAAAGGAGAGGCTAAAGCAACTGGCACAAACCATAATGGGACATCATTCATGGAACCTTGGGTTGAATAACACTCAATTTGGTAGGGTTAAGCAGGTTCGACTTTCATCTATCTGGCAACACTCCCTTCATGGCAATGGTGGTAATGGCTCACCTTCCCCTGCCCCTCAGCCTCATCCCCATCCTCACCACCATCACCACCACCACCACCACCATCACCATCACCATCACCACCATAGTCACCACCACCATGCCCACGTATTTCCTGAAACTTCACCTGCACCTGCACCTACACCTACACCTACAACTGGGGAAGATTCTACTTCACACAATTTTGGTGCCCCTGCTGCCCCTGCGAGAAGTTTGCCTGCTCCATGGAGAAGTTCTTATGCTCAACCTCCTAATTGTCGATTTGAGCATAGAAAGAGATCTCCCCGGAATACTCAAAAACATGCTCATCTAACACCTGCAGTTTCCCCTACTAATGTTCCACATTATCCTGTTGCCTCACCAGGAGTTGGACCCCCAGCACATCATGGCTTTCATTCTTTGGTTCCTGCTTTGAGTCCTTTACCAAATGTAGCATTTGCACATGCTGAGCCCCCTCCTAAGAATGATTCATCAGCTGAACGTCCTAAATCACATTTTCAATGGCCATCACCGTCTTTTTCTTCTGCAGGTTGTGTTGGGACTGTCAAATGGACATCTTTAGTGTTTTTAGTAGTCGTATTACTTGTATAA 1539 0.4594 MGKPGEHHPLPSYSAAEDQRRNAAPPPGCAVGLRCLVVMLFSVAVFLSPLFWLPPFAHFADPKDLHLDSKYKDHDIVASFYVQKPVSLLEDNILLLSKDIFEEIGVPSTKVVILSLDPLPRSNTTKVVFAVDPDGKYSEMSAAAISLIRASFKYLVIRQSYLQLTTSLFGVPSVFEVLKFKGGITIIPQQSVFPLQTVQTLFNFTLNFSIYEIQSIFDELTSQLKSGLHLAPYENLYVILSNSEGSTVTAPTVVQSSVLLAVGIPPSKERLKQLAQTIMGHHSWNLGLNNTQFGRVKQVRLSSIWQHSLHGNGGNGSPSPAPQPHPHPHHHHHHHHHHHHHHHHHSHHHHAHVFPETSPAPAPTPTPTTGEDSTSHNFGAPAAPARSLPAPWRSSYAQPPNCRFEHRKRSPRNTQKHAHLTPAVSPTNVPHYPVASPGVGPPAHHGFHSLVPALSPLPNVAFAHAEPPPKNDSSAERPKSHFQWPSPSFSSAGCVGTVKWTSLVFLVVVLLV* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0914 512 PANTHER F20B24.21 1 509 - -
Gso10g0914 512 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 509 - -
Gso10g0914 512 MobiDBLite consensus disorder prediction 307 428 - -
Gso10g0914 512 MobiDBLite consensus disorder prediction 462 482 - -
Gso10g0914 512 MobiDBLite consensus disorder prediction 325 351 - -
Gso10g0914 512 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0914 Gso-Chr10 19122182 19128750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0914 14 511 C3H Transcription Factor Family AT3G10810 45.347 7.64e-88 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0914 - - gmx:100819068 938.717