Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0901 ATGCTTGGACAAGAGAATTGTGTCCTTAAATCACCATTCTTGCTATGTATCTTCATTGGCTTCTTGATGCATTCTGTTGTGGGAGCTGAGATTCCATTGGGTTCCAAGCTTTCTGTGGTTGATAATGATTATTGGGTTTCCTCCAATGGTGATTTTGCATTTGGATTCTACAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGCATTAGATTCAATTCCAAGTCTATACCATATAGCCAACAAACTGTGGCTTGGGTTGCAGGTGGTGATGTCAAAGTAGGTAACAAGTCCTACTTTGAACTCACTCAGGAAGGGGAACTGGTCCTGTTTGATTCCATAGGTGAGGGTTCTGTTTGGACCGTCAAAACGGGAAACCAATCTGTAGCTTCAGCTTCACTTCTTGACAATGGAAATCTTGTTCTAATGGACAAGGAGCAAAAAATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCAGGACAAAGTTTGTTTGCTAATGAAACGCTTCGGGCTGCTACCGCAAGCAAGAATAGCAAGGCCAGTTACTATACTCTTCACATGAATGCTTCAGGTCATTTGGAGCTACATTGGGAAAGTGGTGTTATCTACTGGACAAGTGAAAACCCTTCTGCTTCAAATCTCCGTGCTTTCCTTACAGCCAGTGGAGCACTAGAGCTTCAAGACCGAAGCTTGAAACCTGTTTGGTCTGCATTTGGAGATGATCACAATGATTCTGTGAAGTACAGATATCTTCGGCTTGATGTGGATGGCAATCTTCGGTTGTATTCGTGGGTTGAAAGTTTAGGATCGTGGAGATCAGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGCCGTCAACTTGGTGTCTGTGTGTTCAACGCCTCAGGTTCTGCTGAATGCAAATGCCCGTTTGAGGTAACTGGGGGTAACGAATGTTTGGTTCCATATGAGGAGGAGTGTGAATCTGGCTCCAATATGATAGCATATAAGAACACATATCTATATGCATTCTACCCTCCTGATAATTCTTTTATCACAAGTAGTTTGCAGCAATGTGAACAGTTGTGCCTGAATGACACTCAATGTACTGTAGCAACCTTTTCCAATGATGGAACTCCACAATGCTCAATAAAGAAAACTGAGTATATCACCGGTTATTCAGATCCATCTGTAAGCTCAATATCATTTGTTAAGAGATGTTCAGGTCCATTTGCTGTAAATCCAGGTATCACTAAGTCTCCTCCTCCTTCCGAACCGCCTCCTCGGTTCTGTGTTCCTTGCCTAATAGGAGCTTCAACAGGCACATTTTTCATCCTTGTCATTTTCCAGATGGGAATTGTGCTCTTCATCTACAGAAGAAAAAACTCTACCAGGAAAAGGTCCACTTTAACTTTCACAGGCACAAATTCAAAGGGTTTAATTGTTTTGTCCTTCTCAGAAATCAAGAGCCTCACAGGGGATTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCAAACAACCATCCAATTGCGGTTACAGACCTCAATGCGTCCCTAGAGGAAAGGAAGTTCCGAAGTGCTGTTATGAAGATGGGTTGCATCCACCACAAGAACCTTGTGAAACTGGAGGGTTATTGTTGTGAGTTTGATCACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCAGTGGACAAGTACATAGATGATGATGCTCTTTGCAAGGTGCTAACATGGAGAAAGAGAGTTGAGATATGCTCAAGTGTGGCAAAGGCCATATGTTATTTGCACTCCGGGTGCAGGGAGTTTATAAGCCATGGAAACTTGAAATGCGAAAATGTTATGTTGGACGAAAACTTAGGAGCCAAGGTGACTGAATTTGGGTTTGCTATTGCAGATGGCAAAGCAACATATTGTGGCTTTTCAGCTGAGAAGGATATAGAGGATTTTGGCAAGTTAGTTCTAACCTTGTTAACCGGGTGTCGCAATCACGATCACATTGAGCTTTGTGAGTGGGCATATAAAGAATGGATGGAAGAGAGGGTGGCCAATGTGGTTGATAAAAGAATGGAAGGGGGCTACAAATCAGAGGAACTAGAGCACGTGTTAAGAATTGCGTTTTGGTGCCTTCAAATGGATGAACGTCGGAGACCTTCCATGGGGGAGGTAGTAAGAGTACTTGATGGTACATTGAGTGTTGATCCGCCACCACCTCCTTTCGCCTTTCAGAGGCCCTTGCAGGTAGATGATTCAGAAGAAAATGTTTCAGAGTTAGAAGTATGA 2298 0.4273 MLGQENCVLKSPFLLCIFIGFLMHSVVGAEIPLGSKLSVVDNDYWVSSNGDFAFGFYNISDQPNQFSVGIRFNSKSIPYSQQTVAWVAGGDVKVGNKSYFELTQEGELVLFDSIGEGSVWTVKTGNQSVASASLLDNGNLVLMDKEQKIIWQSFDTPSDTLLPGQSLFANETLRAATASKNSKASYYTLHMNASGHLELHWESGVIYWTSENPSASNLRAFLTASGALELQDRSLKPVWSAFGDDHNDSVKYRYLRLDVDGNLRLYSWVESLGSWRSVWQAVENQCKVFATCRQLGVCVFNASGSAECKCPFEVTGGNECLVPYEEECESGSNMIAYKNTYLYAFYPPDNSFITSSLQQCEQLCLNDTQCTVATFSNDGTPQCSIKKTEYITGYSDPSVSSISFVKRCSGPFAVNPGITKSPPPSEPPPRFCVPCLIGASTGTFFILVIFQMGIVLFIYRRKNSTRKRSTLTFTGTNSKGLIVLSFSEIKSLTGDFKNQIGPKVFKGLLPNNHPIAVTDLNASLEERKFRSAVMKMGCIHHKNLVKLEGYCCEFDHRFLVYEYCKKGSVDKYIDDDALCKVLTWRKRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENLGAKVTEFGFAIADGKATYCGFSAEKDIEDFGKLVLTLLTGCRNHDHIELCEWAYKEWMEERVANVVDKRMEGGYKSEELEHVLRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAFQRPLQVDDSEENVSELEV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0901 765 SMART ntp_6 329 407 IPR003609 -
Gso10g0901 765 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Gso10g0901 765 ProSiteProfiles Bulb-type lectin domain profile. 158 278 IPR001480 -
Gso10g0901 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 184 277 IPR036426 -
Gso10g0901 765 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Gso10g0901 765 Gene3D - 157 272 IPR036426 -
Gso10g0901 765 Pfam D-mannose binding lectin 83 173 IPR001480 -
Gso10g0901 765 Pfam PAN domain 339 399 IPR003609 -
Gso10g0901 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 211 IPR036426 -
Gso10g0901 765 SMART blect_4 36 157 IPR001480 -
Gso10g0901 765 SMART serkin_6 494 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0901 765 Gene3D Phosphorylase Kinase; domain 1 457 563 - -
Gso10g0901 765 CDD B_lectin 46 157 IPR001480 -
Gso10g0901 765 ProSiteProfiles EGF-like domain profile. 282 321 IPR000742 -
Gso10g0901 765 PIRSF SRK 5 642 IPR024171 GO:0004674
Gso10g0901 765 PIRSF SRK 640 764 IPR024171 GO:0004674
Gso10g0901 765 ProSiteProfiles Protein kinase domain profile. 468 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0901 765 Gene3D Transferase(Phosphotransferase) domain 1 565 639 - -
Gso10g0901 765 Pfam Protein tyrosine and serine/threonine kinase 512 638 IPR001245 GO:0004672|GO:0006468
Gso10g0901 765 Gene3D Transferase(Phosphotransferase) domain 1 640 740 - -
Gso10g0901 765 SUPERFAMILY Protein kinase-like (PK-like) 482 732 IPR011009 -
Gso10g0901 765 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Gso10g0901 765 Gene3D - 27 156 IPR036426 -
Gso10g0901 765 PANTHER OS07G0415500 PROTEIN 6 763 - -
Gso10g0901 765 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 6 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0901 Gso-Chr10 17672214 17675469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0901 369 743 Receptor kinase-like Gene Family AT4G05200 26.218 1.70e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso10g0901 PK_Tyr_Ser-Thr 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0901 - - gmx:100815678 1559.66