Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0854 ATGGTTCGTAACGACAGCAGCAACAAAGAGAAGGAGAAAAACCTCGATGATCAGCCTTTGTTCGATCTGAACTACGATGGCGACGAGGAAGATGCCGTCGTCGACGAAGAACAGCAGGAGATTGAAGGTGTGAAGTACCAGAGTGAGAGTAGTAGTGATGGCGACGACGACGATGGTGGTGGTAGGCATGCTGCGAATGGGAGAGCACAGCCTGACTCTTTCTCTTCTCAGCAATGGCCTCAGAGTTACAAAGAGACTACAGATTCTTACACAATAGCTGCTGCTCCAAATTTTGAGTCAGTTCTGCGGGGGCCGAGTTTTATATATTCTAGTTTTGACAATCGTTCAAAGAGTAACTTAGACATCGATGGAAAGACACCTTTTCTGTCTGCTCCAGAAGGCATTAGACAATCAACTTGGTGGGAGAAAGCCTCAGTAGAACGGCTTGTTTCCGGAGAATTGCCTATTGGATATGGATGCAGCTTCACTCAAACAATTTTCAATGGCATTAATGTGATAGCTGGAGTTGGCCTTCTATCTACACCATTTACAGTAAATCAAGCTGGGTGGATGAGCTTGGCAGTGATGCTTCTTTTTGCAGTTATGTGTTGTTACACAGCCACCCTTCTGAGATACTGCTTTGAAAGCAGAGAAGGAATCATTACCTACCCAGATGTAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGCTGTATCGATAATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTAGTCTGTTTCCTGGTACATCCTTAGATTTGGGTGGTTTCAAGTTAGACTCTATGCATATGTTTGGAGTTTTGACAGCACTTATTATTCTCCCAACGGTTTGGCTGAAGGATCTTCGTATAATCTCTTATCTATCAGGTGGAGGGGTTGTTGCAACAATTTTGATTATGATTTGCGTGTTTTGTGTTGGGACAATAGACAGTGTTGGATTCCATCACACGGGTCAATTGGTAAAATGGAATGGCATTCCATTTGCTATTGGTGTCTATGGATTTTGCTTTGCAGGACATTCGGTTTTCCCAAATATTTACCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCACTAATAATATGTTTTGTTTTGTGTGTTTTGATATATGGAGGCACTGCAAGCATGGGATATCTCATGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCACCAGGCGCATTTGCTTCCAAAGTTGCATTGTGGACAACTGTTATTAATCCATTGACTAAATATGCTTTGTTGATGAACCCACTGGCAAGGAGTCTAGAGGAGTTGCTGCCAGATAGAATTTCATCTTCATATTGGTGCTTCATGCTTCTTAGAACAACACTTGTTGCATCTACAGTTTGTGTTGCCTTTCTAGTTCCCTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTCTTTAGTATACTTGTGTCAGCGATAATGCCAAGTTTATGTTTTCTGAAAATTATTGGGAAAAAAGCTACAAAGACACAGGTTGCACTCAGTGTTGCAATTGCTGCATTCGGAGTCATTTGTGGAATCCTTGGAACATATTCCTCTCTGTTGAGTATTGCGGATAGTTACTGA 1647 0.4159 MVRNDSSNKEKEKNLDDQPLFDLNYDGDEEDAVVDEEQQEIEGVKYQSESSSDGDDDDGGGRHAANGRAQPDSFSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFDNRSKSNLDIDGKTPFLSAPEGIRQSTWWEKASVERLVSGELPIGYGCSFTQTIFNGINVIAGVGLLSTPFTVNQAGWMSLAVMLLFAVMCCYTATLLRYCFESREGIITYPDVGEAAFGRYGRIAVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGFKLDSMHMFGVLTALIILPTVWLKDLRIISYLSGGGVVATILIMICVFCVGTIDSVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALIICFVLCVLIYGGTASMGYLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPDRISSSYWCFMLLRTTLVASTVCVAFLVPFFGLVMALIGSLFSILVSAIMPSLCFLKIIGKKATKTQVALSVAIAAFGVICGILGTYSSLLSIADSY* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0854 548 MobiDBLite consensus disorder prediction 1 19 - -
Gso10g0854 548 MobiDBLite consensus disorder prediction 22 37 - -
Gso10g0854 548 PANTHER OS05G0424000 PROTEIN-RELATED 52 546 - -
Gso10g0854 548 Pfam Transmembrane amino acid transporter protein 161 540 IPR013057 -
Gso10g0854 548 PANTHER AMINO ACID TRANSPORTER AVT1A 52 546 - -
Gso10g0854 548 MobiDBLite consensus disorder prediction 1 82 - -
Gso10g0854 548 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0854 Gso-Chr10 13452989 13460368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0854 45 483 Amino Acid or Auxin Permease AAAP Family AT2G41190 65.848 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0854 K15015 - gmx:100816431 1058.9