Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0840 ATGGCTGAAACTGACATCCAAGACTATCTCCAACTCTTCTTCCTCTGGTTACTCTCCATCATCGCCGTTAGAGCCATACTCACCAAACTCCGCCACAAGCCTCGCCGTCCACCGGGCCCACGGTCCCTCCCCATCATCGGCCACCTCCATCTCATCTCCGCCCTGCCTCACCAGTCTTTCCACGCGCTCTCCACGCGCTACGGCCCCGCCGTGCAAGTCTTCCTCGGCTCCGTCCCCGCCGTGGTCGTTTCGTGCCCGGAACTCGCGAAGGAGTTCCTGAAAACGCACGAGCCCAGCTTCTCGAACCGGTTCGTGAGTGCAGCGGTTCACCACCTGTCCTATGGGTCCAAGGGGTTCCTCTTCGCGCCCTACGGAAGCTACTGGAGGTTCTTGAAGAAGATTTGCATGTCGGAGCTTCTCGGTGGCCGCACCCTCGACCAGTTCCGGCACTTGAGGGAGCAAGAAACTTTGAGGTTTCTGCGCGTGTTGAGGGCGAAAGGGGAGGCGCATGAGGCCGTGGATGTTAGTGGGGAGTTGATGACTTTGACCAACAGTGTAATATCGAGGATGGTTTTGAGTCGAACATGTTGCGAGAGCGATGGTGACGTGGAGCACGTGAGGAAGATGGTGGCGGACACTGCTGAGCTGGCGGGGAAGTTCAACTTGGCGGATTTTGTGTGGTTGTGTAAGGGGTTGGATTTGCATGGGATAAAGAAGAGGCTTGTGGGTATTTTGGAGAGGTTTGATGGCATGATGGAGAGGGTGATAAGGGAGCATGAGGAGGAGAGGGAGAGAAGGAAGGAAAGAGGGGAAGGGGAGGAGATTAGGGATTTGCTTGATATTTTGTTGGAAATTCATCAAGATGAGAGCAGGGAGATCAAGTTATCTAGAGAGAATGTCAAGGCTTTCATCTTGGACATATATATGGCAGGAACCGACACATCAGCTATAACCATGGAGTGGGCACTAGCAGAGTTAATCAACAACCATCATGTGATGGAGAAAGCAAGACAAGAGATAGATTCAGTGACAGGGAACAAAAGGCTAATACAAGAATCAGATCTTCCCAACCTTCCATACCTACAAGCCATAGTCAAAGAAACACTAAGGATTCACCCTACAGCGCCACTGCTAGGGAGAGAATCATCAGAAAGCTGCAATGTATGTGGCTATGACATTCCAGCAAAGTCCTTAGTGTTTGTTAATCTGTGGTCTATGGGAAGGGACCCCAAAATTTGGGAGGACCCTCTTGAGTTCAAGCCAGAGAGGTTTATGAACAATAATGAAGACAAACAAATTGATGTGAGGGGACAGAATTTCCAGCTATTGCCATTTGGGACTGGGAGAAGGTTGTGCCCTGGTGCATCACTTGCACTTCAGACTGTGCCTACTAACGTTGCTGCTATGATTCAATGCTTTGAATTTAGGGTTGATGGGACTGTTAGCATGGAAGAAAAACCAGCCATGACACTTCCTAGGGCACATCCTTTGATTTGTGTCCCTGTGCCACGCATGAACCTTCCCTTCTAG 1530 0.5078 MAETDIQDYLQLFFLWLLSIIAVRAILTKLRHKPRRPPGPRSLPIIGHLHLISALPHQSFHALSTRYGPAVQVFLGSVPAVVVSCPELAKEFLKTHEPSFSNRFVSAAVHHLSYGSKGFLFAPYGSYWRFLKKICMSELLGGRTLDQFRHLREQETLRFLRVLRAKGEAHEAVDVSGELMTLTNSVISRMVLSRTCCESDGDVEHVRKMVADTAELAGKFNLADFVWLCKGLDLHGIKKRLVGILERFDGMMERVIREHEEERERRKERGEGEEIRDLLDILLEIHQDESREIKLSRENVKAFILDIYMAGTDTSAITMEWALAELINNHHVMEKARQEIDSVTGNKRLIQESDLPNLPYLQAIVKETLRIHPTAPLLGRESSESCNVCGYDIPAKSLVFVNLWSMGRDPKIWEDPLEFKPERFMNNNEDKQIDVRGQNFQLLPFGTGRRLCPGASLALQTVPTNVAAMIQCFEFRVDGTVSMEEKPAMTLPRAHPLICVPVPRMNLPF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0840 509 SUPERFAMILY Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Gso10g0840 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 506 - -
Gso10g0840 509 Pfam Cytochrome P450 37 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g0840 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0840 Gso-Chr10 12875291 12907676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0840 4 504 Cytochrome P450 AT5G06900 47.316 1.71e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0840 K24188 - gmx:100805931 978.008