Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0836 ATGGGGTTCTCCATAGCTGTTGATAAATTAGAAGAAGAAGCACAACAACAACAACAAGAGCAAGAGACAAAGTCTTTAGGTTCCTCTTTGAATATCGTCATGGCTTCTTCAAGTGTTAAGAGCAATACCAACTCAACAACTCAACTTGAACCATTCCTCCCACCTTTACATCTTCATCATCAACAACAACCACCACAACATCATTTTCATCATCATCAAATACCAGACCAACAAATCTCTTTTGGGATGATGCCATCTTCCTCATTAGCTTCTATCCCAGGAAATTTCTTAAGCAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTTTTTTTGTATCTTGAAGGTCAGGCTGACCCTTCTAGTGTTCAAGACCAAAAACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAACCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTAACATGGGATTACCCTCCACACAAACCAGCACTGGCTCAAAGAGACAACCAGAGTCATCCATGGCCAAGCCCAATCCACACACTGAAGCCCCTTCTGCACCTGAGCCACCCAAAGCTGTAAAGCGAGAGGGCAATCGCAAGGGAACAACATCAAGCTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTAAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTCAGGAAAAAGGCGTACGTTCAGCAACTAGAGTCAAGTAGGATTAAGCTTAATCAGATAGAACAAGAGTTACAACGTTCTAGAGCTCAAGGCATATTAATGGGCGGAAATACACTTCTGGGTGGGGAGCAAGGCTTTCCTATGGCCATGAGTGGAATTAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGCGAGATGGTTAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGCACTCCAAGAACACCTTCATGAGAACGAGCTTCGTTTATATGTGGACAATTGCCTGGCTCACTATGACCAAGTAATGAACCTTAAGAGCATGGTGGCCAAAATCGACGTATTCCACCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGCTTCAGGCCATCTGAACTCATCAAGGTATGTATTATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGATGCTCTTAACCAATCTCTCTCAGAGACTATAACATCGGACTCTTTGTGGTGTCCTCCAAATATGAATAACTACATGGGACAAATGGTTGTGGCAATGAACAAACTCTCCACTCTTGAAAGCTTTGTGAGACAGGCTGATAACCTCAGGCACCAGACAATTCACCGTCTGCACCAACTTCTAACAACACGCCAAGCTGCAAGGTGTTTGGTGGCCATTTCTGAGTACTTCCATCGTCTCAGAGCCCTAAGTTCTTTGTGGTCGACTCATCCTCGCCAAGATCAGTAG 1560 0.4532 MGFSIAVDKLEEEAQQQQQEQETKSLGSSLNIVMASSSVKSNTNSTTQLEPFLPPLHLHHQQQPPQHHFHHHQIPDQQISFGMMPSSSLASIPGNFLSKDSGAYDLGELDQAFFLYLEGQADPSSVQDQKQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVNMGLPSTQTSTGSKRQPESSMAKPNPHTEAPSAPEPPKAVKREGNRKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQIEQELQRSRAQGILMGGNTLLGGEQGFPMAMSGISSEAAMFDVEYARWLEEHHRIVCELRAALQEHLHENELRLYVDNCLAHYDQVMNLKSMVAKIDVFHLVFGMWKTPAERCFMWIGGFRPSELIKVCIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLWCPPNMNNYMGQMVVAMNKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWSTHPRQDQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0836 519 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Gso10g0836 519 Gene3D - 224 274 - -
Gso10g0836 519 MobiDBLite consensus disorder prediction 122 228 - -
Gso10g0836 519 SUPERFAMILY Leucine zipper domain 225 267 IPR046347 GO:0003700|GO:0006355
Gso10g0836 519 MobiDBLite consensus disorder prediction 122 142 - -
Gso10g0836 519 Pfam bZIP transcription factor 225 258 IPR004827 GO:0003700|GO:0006355
Gso10g0836 519 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 108 517 - -
Gso10g0836 519 PANTHER TRANSCRIPTION FACTOR TGA9 108 517 - -
Gso10g0836 519 SMART brlzneu 221 307 IPR004827 GO:0003700|GO:0006355
Gso10g0836 519 MobiDBLite consensus disorder prediction 151 187 - -
Gso10g0836 519 CDD bZIP_HBP1b-like 225 277 - -
Gso10g0836 519 Pfam Seed dormancy control 316 388 IPR025422 GO:0006351|GO:0043565
Gso10g0836 519 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 223 267 IPR004827 GO:0003700|GO:0006355
Gso10g0836 519 Coils Coil 244 271 - -
Gso10g0836 519 MobiDBLite consensus disorder prediction 1 29 - -
Gso10g0836 519 ProSiteProfiles DOG1 domain profile. 298 514 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0836 Gso-Chr10 12753634 12761975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0836 94 518 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.247 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso10g0836 DOG1 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0836 K14431 - gmx:100800059 957.592