Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0832 ATGGTTCACAACTACGTGTTCGTGAATCTCACCGTCCTCGTTGTCCTCTCGGCAACTTTGGTTTCTCGCTGTTTCGCGTTTACGGATCCCCCTGACGTCACAGCTCTGCAGGATCTATACAGGGCTTTAAACAGCCCAGCAGTGCTGAATGGATGGAACGGTAACGATCCTTGTGAGGAATCTTGGACAGGAGTAGCATGTTCTGGCTCATCAGTTATACACCTCAAAATTCGTGGACTAAGCCTTACCGGGTATCTTGGAGGCTTGCTCAATAATCTACAAAACTTGAAGCAACTTGATGTCAGTTCTAACAACATAATGGGTGAAATACCACTGGGTTTACCCCCGAATGCCACACATATGAATTTAAGCCATAATTTCTTGAATGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCGTACAATAATTTCACAGGTGATCTGCCAAGTTCATTTGGTTCCTTGACAGACCTTAATAGATTGCTCCTGCAGAATAACAGATTCACAGGATCAGTCACCTACCTGGCTGAACTTCCACTCATTGATTTGAACATTCAAGATAATCTGTTCAGTGGCATTCTTCCACAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAACAAGTTCCATGCAGTAGACGGCTCTCCTCCCTGGGCATTTCCTTTGGACAATGTACCCATTGAGCAAAACACTAGTCGCCCACCCGTAACTCAGGCGAATGCCGTTGAGAACTACGATCCTCCTAAAGTAAGGAAACAAAAGAACAAACATATGGGTCCCGGAGGAATAGCTTTTATGGTTGGTACAGGAACATTATTGGCGACAGGTTTTGCGCTCTTCATTGGGATCCGATTGAAAAAGCTCCATAGACAGAGAATGGAGGACTATGAAAGAAACCATAGTTCATTGCCTAGTCATCCATTTTTAATGGTGATAGATGTATCTACTACGGCGATTGACGAGAGCTTGCAAATCCCACCTTACAATGCTGCATCTCTTTTGAGTCCAAGGCGATTAACTTCCCAGATCCATAAAAGAACAGGGCAAACATCAAGAAAGAGTTTTTCGGGAAGAGATAGATTCACTGGAAGGACAAAGGTTTATACAGTAGCGGAGGTTCAGTTGGTTACCAACAGTTTCCATGAAGACAACCTTCTGGGAGAGGGATCCCTTGGCCCTGTTTACAGAGCTGAATTTCCAGAAAACAAGGTTTTCGCAGTGAAGAACATTAACATGGCTGGTATGTCTTTCATTGAAGAGGAAAAGTTCTTGGATGTAGTTTGCACTGCTTCCCGTCTGAACCACCCCAACATAGTTTCACTTAAAGGCTACTGCTTGGAGCATGGACAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCACAGTGCAGCATACAAACCTTTATCTTGGGGCACACGTCTCAGAATCGCTTTAGGAGTTGGTCAGGCCCTGAACTATTTGCACTCGACTTTCTCTCCTGCTGTCTCCCATGGAAACTTAAAGGCTACCAATGTTCTACTGGACGAAAATCTCATGCCTCGTGTTACTGACTGCGGCTTGGCTATTTTGAGACCACTGACAAGCGACAAAATAAAAAATCGGGCTTCTGAGATTGATATTAGGGATATAGGATATAGTTCCCCAGACCATGGCCAACCAGGAATTGGCAGCACGAAGAGTGACATCTTTTCCTTCGGAGTATTGCTTCTTGAACTGTTAACAGGAAGAAAACCATTCGATGGTTCCAGGCCAAGGGAAGAGCAATATCTGGCAAAGTGGGCTTCATCAAGGCTTCATGATTGCGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAAAGAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCACTCAGCCAGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGGACTCTCTTGTATCGTTTTCTCAAAATCTCCTTTCAAAGAGTGGTGCTGCAGATGACACTGAACTTGATCCACTTGAGAGGTCTTTTCGCACAACCACCTCACGCTTTATCAGTTCACCCGCATTGAGCTATGTATCTGCCTGA 2133 0.4412 MVHNYVFVNLTVLVVLSATLVSRCFAFTDPPDVTALQDLYRALNSPAVLNGWNGNDPCEESWTGVACSGSSVIHLKIRGLSLTGYLGGLLNNLQNLKQLDVSSNNIMGEIPLGLPPNATHMNLSHNFLNGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLTDLNRLLLQNNRFTGSVTYLAELPLIDLNIQDNLFSGILPQHFQSIPNLWIGGNKFHAVDGSPPWAFPLDNVPIEQNTSRPPVTQANAVENYDPPKVRKQKNKHMGPGGIAFMVGTGTLLATGFALFIGIRLKKLHRQRMEDYERNHSSLPSHPFLMVIDVSTTAIDESLQIPPYNAASLLSPRRLTSQIHKRTGQTSRKSFSGRDRFTGRTKVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPENKVFAVKNINMAGMSFIEEEKFLDVVCTASRLNHPNIVSLKGYCLEHGQHLLVYDYVRNLTLDDALHSAAYKPLSWGTRLRIALGVGQALNYLHSTFSPAVSHGNLKATNVLLDENLMPRVTDCGLAILRPLTSDKIKNRASEIDIRDIGYSSPDHGQPGIGSTKSDIFSFGVLLLELLTGRKPFDGSRPREEQYLAKWASSRLHDCDSLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRPPMSEIVDSLVSFSQNLLSKSGAADDTELDPLERSFRTTTSRFISSPALSYVSA* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0832 710 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Gso10g0832 710 Gene3D Phosphorylase Kinase; domain 1 349 467 - -
Gso10g0832 710 SUPERFAMILY Protein kinase-like (PK-like) 366 666 IPR011009 -
Gso10g0832 710 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Gso10g0832 710 Pfam Protein tyrosine and serine/threonine kinase 393 666 IPR001245 GO:0004672|GO:0006468
Gso10g0832 710 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 3 710 - -
Gso10g0832 710 Gene3D Transferase(Phosphotransferase) domain 1 469 685 - -
Gso10g0832 710 SUPERFAMILY L domain-like 28 217 - -
Gso10g0832 710 ProSiteProfiles Protein kinase domain profile. 390 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0832 710 Gene3D Ribonuclease Inhibitor 29 242 IPR032675 -
Gso10g0832 710 PANTHER OS01G0253100 PROTEIN 3 710 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0832 Gso-Chr10 12533386 12538709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0832 11 710 Strubbelig Receptor Gene Family AT5G06820 52.044 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso10g0832 PK_Tyr_Ser-Thr 5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0832 - - gmx:100793182 1378.23