Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0831 ATGTTGTTGTTGGCCATGGACGAATCACCGGCGAACAGAGAGAGCAAAAGCGAGGAAGAAGAAGAAGATGATGGCTACATGGGTGACCTTTCTCAGTTTCTTCCTTCCGATGCTCTCGAACCTGCTAAGTTGTCTTCGTCCAAAAAGATTTCCAGCAAGAAAGATCCTTCAGTCAACTCTTCCAAGAACTGGTTGAAAACTCTTAACTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGGAAGCAACAAGAAGAGGATGAGCTAACATTAGCGAAAGTGGAAGCTCCAATACCACAATCCAACATTGGATTTAAGCTTCTCAAACAGATGGGTTATTCTCCAGGTTCTGCCCTAGGCAAGCAAGGCTCGGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCTGGTGTAGGCTTAGAAGACCCCCACAAGGAGAAGAGGAAAAAGGAGGAAATCATGATGGACAGGAAAAGAAGGAAAGAGGAGGACCTAATGAAAGAATTTGGGTCTAGGCAGAAGTCACAGTGGCAGAGTAGGAGAGTTATAATTAATTACAATAAGGCAAAGGCTGCCCTTGACCAACTGGAGAATAGGGTAATTGTGGAGCCACAAAAGAATGACGATGTTGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCACGATGTTTTGATGAAACTGAGGGATGAATTTAATTATTGCCTCTTTTGTGGATGCCAATATGAATCGAACCATGCCCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAA 804 0.4478 MLLLAMDESPANRESKSEEEEEDDGYMGDLSQFLPSDALEPAKLSSSKKISSKKDPSVNSSKNWLKTLNWQERRKLERERKQQEEDELTLAKVEAPIPQSNIGFKLLKQMGYSPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMMDRKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLENRVIVEPQKNDDVAEGEEEEEEEITEEDLHDVLMKLRDEFNYCLFCGCQYESNHALLANCPGTNEDDH* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0831 267 MobiDBLite consensus disorder prediction 140 178 - -
Gso10g0831 267 Coils Coil 150 170 - -
Gso10g0831 267 MobiDBLite consensus disorder prediction 51 67 - -
Gso10g0831 267 Pfam Domain of unknown function (DUF4187) 216 267 IPR025239 -
Gso10g0831 267 SMART DUF4187_2 213 267 IPR025239 -
Gso10g0831 267 SMART G-patch_5 97 143 IPR000467 GO:0003676
Gso10g0831 267 MobiDBLite consensus disorder prediction 1 87 - -
Gso10g0831 267 Pfam G-patch domain 99 142 IPR000467 GO:0003676
Gso10g0831 267 MobiDBLite consensus disorder prediction 68 87 - -
Gso10g0831 267 ProSiteProfiles G-patch domain profile. 99 145 IPR000467 GO:0003676
Gso10g0831 267 MobiDBLite consensus disorder prediction 140 172 - -
Gso10g0831 267 Coils Coil 74 94 - -
Gso10g0831 267 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 22 267 - -
Gso10g0831 267 Coils Coil 181 201 - -
Gso10g0831 267 PANTHER UNCHARACTERIZED 22 267 IPR039249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0831 Gso-Chr10 12507237 12510109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0831 91 141 C2H2 Transcription Factor Family AT5G26610 45.098 8.73e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0831 - - gsj:114369185 499.204