Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0820 ATGGCTTTTGGCTTGCCAATGAAGGCCATGGAAGCAACTGTGTGTGGAGACAAGTTAGGCAATCTCATATTGGAATTAGCTAAAAACTTTGCTATATACATTGGAATGGTGATTGCGTGCAATGGTTTACATCTTCTACTGAAGCCTTATAAACAACCACGCATTACTTCAGACATAATTGTAGGACTAGTTGTGGGGAGAATAGGATTCGTACGTAGACTATTCGCGAAATTCAACCTAACGTTTGGGTTTATCATTGATTTTGGAATGACATGTTATATGTTTGCATTGGGGATAGAGATGGATCCTCATGCTCTGTTTGCACGACCAAATAGGTACACTAAGGTTGCTTTTACAGGAGTTTTATGCACGTTGGTCGTGACAGGAATTTCAACACCGATTTTTCGATACTTCCCAAGTCATCATAGGCTAATAGATTTCACCCTCTGCTTCGCCACATTGGCTGCTAGCACAGACTCGCCAGTGCTGACACGCTTAATAACTCAGCTCAAAATAGGCAAATCCGACATAGGGAAGCTTGTGATTGGAGCAGGGGTGCACTCAGATTTTGTGTGCTGTTTGATCCTTTGCATTGGGTACATTGTTCTTCCATTGCCTGAATTTTGCCACCATTTGGAAGACAAGATGGACATTAAGAAGTCCCTTCAAATGGGGTGTGCAGTGGTGGTGCAGGTAGTGTTCACTGCCATGGTTTCACCAATCCTTATGAAGTGGGTTGGTAATGAAAACCCTGAAGGTAGACCCATGAAAGGCCCACACTTGATACTCTCACTTGCCTTCATGGTCTTAATGTGTGCCTCCACCACTATGTATTACTATCATCCAATCTTAAGTGCTTTTTTAGTAGGCCTTTGTGTTCCCAGGGAGGGTAGAGTTTCCAAATGGGTTATCACCAAAATCAATTATTTGATGACCACTATTTTCTTTCCCATCTTTTTCCTGTGGATGGGGTATGAAACTGATTTCACGATGATTGATGCACCTAATGCTTTCACATGGATAAGACTAGTTGTGCTCTTTACAGTGGCAACAGCTGGAAAAGTTGCTGGAACAGTTATTTCTGGTGCCATGCTGGGCTTTCACTGGCCCGAATCCGTTGCAATTGGAATGCTCCTTGTCACTAAGGGCCATTTGCAAATCTACTTAGCTATCAAAGTGATAGGTTGTGGTGCTACAAGTATGTCCACCGGCATTGTCATGGTAATTGCAACCTTTTTAACAACTTTGCCTGCCCCAACAATTGTGGCAAAAATCATTAAACGTGCAAGGAAAAGAGCACCTACTCATCGTTTGGCGCTTCAATTGCTTGACCCTTTAAGTGAGCTAAGGATCCTCCTGTGTGTCCAAGGACCTCAGAATGTTCCTGCCTCCATTAACTTGGTCGAGATCACGAAAGGGACGGCTGACACCAGTATTGTGCTATATGTCACTGACATGATTGAACTCACTGATGAATTATCAGACACATTGGAGAGGGATGAAGGAGTGCACACGACCACAGTGAAAGACAAAGAAGTCATGGACATGAGAGACCAAGTAACCAACTTATTTCAAGCCTATGTGGTGGAGAATGATGATGGCATTACACTCAAAAGAACCATGGCACTCTCAACAATCACTAGCATGCCACAAGACATTTGCATTTTAGCAGAGGACTTGATGGTTGCCCTCATCATATTGCCATTCCACAGGAGTCAGCGTGAGGATGGAAAATTGGATGGTGGTAATTCAGGGTTCAGATACGTGAACCGAAAGGTACTAAGAAATGCCCCTTGTTCTGTTGGGATTCTAGTAGATAGAGGCCTTGGATCAGTTGAGCATATAACAAGATGTCAAGTAGCAGTAAATGTGGGAGTCATATTCATTGGGGGAAAAGATGATAGGGAAGCACTTGCCTACGCTAGCCGTGTAGCGCAGCATCCACAAGTTAAGCTCACAGTAATAAGATTCCTGGAAGATAGCAGTGTAGAATCCTCATCATTGTTCAGGATCATCCTTCCAGAGCAGGAGCAGGAGAAGCAGTTGGATGATGAATGCTTTACACAGTTCTACGAAAGGCATGTGATCGGAGGAGGTAGGATTTCCTATATGGAGAAGCATCTTGCAAATGCTTCTGAGACCTTCTCCACTCTCAGATCATTTGAAGGGCAATACTCATTGGTTATTGTTGGAAGAGAAGGAGGAATGAACTCTATTTTGACAAGGGGAATGAATGATTGGCAACAATGCCCGGAATTGGGACCAATAGGGGATGTTCTTTCAGGATCAGACTTCTCTACAACTCTTTCTGTTTTGATCATCCAACAACATAGACTTAAAGGAGAAATAGATGGGTTAGATGAAGACTTCTCTATGATATAA 2382 0.4307 MAFGLPMKAMEATVCGDKLGNLILELAKNFAIYIGMVIACNGLHLLLKPYKQPRITSDIIVGLVVGRIGFVRRLFAKFNLTFGFIIDFGMTCYMFALGIEMDPHALFARPNRYTKVAFTGVLCTLVVTGISTPIFRYFPSHHRLIDFTLCFATLAASTDSPVLTRLITQLKIGKSDIGKLVIGAGVHSDFVCCLILCIGYIVLPLPEFCHHLEDKMDIKKSLQMGCAVVVQVVFTAMVSPILMKWVGNENPEGRPMKGPHLILSLAFMVLMCASTTMYYYHPILSAFLVGLCVPREGRVSKWVITKINYLMTTIFFPIFFLWMGYETDFTMIDAPNAFTWIRLVVLFTVATAGKVAGTVISGAMLGFHWPESVAIGMLLVTKGHLQIYLAIKVIGCGATSMSTGIVMVIATFLTTLPAPTIVAKIIKRARKRAPTHRLALQLLDPLSELRILLCVQGPQNVPASINLVEITKGTADTSIVLYVTDMIELTDELSDTLERDEGVHTTTVKDKEVMDMRDQVTNLFQAYVVENDDGITLKRTMALSTITSMPQDICILAEDLMVALIILPFHRSQREDGKLDGGNSGFRYVNRKVLRNAPCSVGILVDRGLGSVEHITRCQVAVNVGVIFIGGKDDREALAYASRVAQHPQVKLTVIRFLEDSSVESSSLFRIILPEQEQEKQLDDECFTQFYERHVIGGGRISYMEKHLANASETFSTLRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGSDFSTTLSVLIIQQHRLKGEIDGLDEDFSMI* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0820 793 Pfam Sodium/hydrogen exchanger family 32 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso10g0820 793 PANTHER CATION/H+ EXCHANGER 3 14 790 - -
Gso10g0820 793 Gene3D - 29 435 IPR038770 -
Gso10g0820 793 Gene3D - 465 746 - -
Gso10g0820 793 PANTHER CATION/H + ANTIPORTER 14 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0820 Gso-Chr10 12090914 12095331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0820 13 793 Antiporter Super Family AT3G52080 47.118 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0820 - - gmx:100786469 1565.82