Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0808 ATGACCAATTATCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATCCATTTGCTCAGTCAGCTTTCACAGGGATATCAAAGGGGCTAACATTCTAGTTGATCCTAATGGTGAAATCAAGCTGACAGACTTTGGAATGGCTAAACATGAACATAAGACTAAGAGGGTCAAAGTTCAAAAGCGTATTCTGGGAAAAAGACTCAATAGGAGCACACAAAATGAATTGCTTCAAGTCCAAAAATGGAGCAATATGAAATTCTTGAACACATTGGAAGAGGTTCCTTTGCCTCAGCTCTACTTATCAGACACAGGCACGAAAACAAAAGGTATATCCTTAAGAAGATACGTCTTGCCCGCCAGACTGACAAAACTAGTAGATCTGCTCACCAGGAGATGGAGCTTATCTTTAAAGTTCGCAATCCATTTATAG 429 0.3963 MTNYQKSASNNLIRRSICSVSFHRDIKGANILVDPNGEIKLTDFGMAKHEHKTKRVKVQKRILGKRLNRSTQNELLQVQKWSNMKFLNTLEEVPLPQLYLSDTGTKTKGISLRRYVLPARLTKLVDLLTRRWSLSLKFAIHL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0808 142 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 22 54 - -
Gso10g0808 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0808 142 Gene3D Transferase(Phosphotransferase) domain 1 13 107 - -
Gso10g0808 142 Pfam Protein kinase domain 22 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0808 142 SUPERFAMILY Protein kinase-like (PK-like) 22 54 IPR011009 -
Gso10g0808 142 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 22 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0808 Gso-Chr10 11854555 11862124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0808 23 49 MAP Kinase Kinase Kinase AT1G53570 96.296 2.45e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso10g0808 Pkinase 9.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0808 K04421 - gsj:114370780 283.108