Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0807 ATGGTACAACGCGGTTTCGTCGCGTTCCTTGAAATTGGGCTAATCGAGGAGAAAAAGCCTCCGCCGCCGCTGGATGACTCGCAACGGCTGTTTCAGCTGCTGTGGATCGACGAGGACGAGATCGAGCTCTTGCAAGGGTTCCTCGACTACACATCGCAGCGAGGATTCTTGCACCACAACGACATTGCTTTGTTCTATGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTCGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGGAACATCCGTAACAAGATTTGCTTCGGCAAGGAATTCTCCTTCAATAGCGCTCACAATCAAGCCACCTTCGAAATCTTGTGCAAGATCTGGAGCAACGTGACTCCAATCGGCGACAATTCATTGGATGACTATGAAATCAACCCCAACCGTAGCCCCAACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAGAATGAAACGATTTTCAGGAATTCCACGGAGAAGAAAACACTGAAACGCTCTCGGCCTCGATCGGCGGTGAAAATCGAGCCAAATGAATTGAGTGCAAAATGA 576 0.4792 MVQRGFVAFLEIGLIEEKKPPPPLDDSQRLFQLLWIDEDEIELLQGFLDYTSQRGFLHHNDIALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNIRNKICFGKEFSFNSAHNQATFEILCKIWSNVTPIGDNSLDDYEINPNRSPNPNLNFSPVILKNETIFRNSTEKKTLKRSRPRSAVKIEPNELSAK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0807 191 Coils Coil 79 99 - -
Gso10g0807 191 Pfam Protein of unknown function, DUF573 31 125 IPR007592 GO:0006355
Gso10g0807 191 MobiDBLite consensus disorder prediction 167 181 - -
Gso10g0807 191 MobiDBLite consensus disorder prediction 167 191 - -
Gso10g0807 191 PANTHER BNAANNG10740D PROTEIN 15 151 - -
Gso10g0807 191 PANTHER BNAANNG10740D PROTEIN-RELATED 15 151 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0807 Gso-Chr10 11838475 11839290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0807 22 181 GeBP Transcription Factor Family AT5G28040 52.941 1.04e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso10g0807 DUF573 2.9e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0807 - - gsj:114371408 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1470 2 29138451 29143907 Gso10g0807 10 11838475 11839290 GST
Gso19g1228 19 40773946 40777815 Gso10g0807 10 11838475 11839290 PCT
Gso10g0807 10 11838475 11839290 Gso19g1228 19 40773946 40777815 PCT