Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0804 ATGTGGCTTTCAATTTTTCTTCTTCTCTGTTTTCAAGGTCTTGCGAGATGTGGAAAGAGTTGCAGACTAAGGTGGCTGAATTACCTAAGGCCAAACCTCAAAAGAGGAAACTACACCAAGGAAGAGGAGGAAACTATTATCAAGCTGCACCGACATCTGGGTAACAGGTATGCAACAAAGCATAGATGTGGAGTAGTTGTTAAAGGACCAAATCTGAGTGGAAATATATCAGGAACAGAGCCATTGAAGGACAACCGCATACTTTTGAAAGCAGAAGCTTTAGATTATTCCCATGAAGCAAGGAACATTGTTGTTGTTGTTAATGAGTTGTCCAAGGAAATAACCAAAAATTTGGTTTCTCATCCTGTGAATGCTAAATGTACTGCAGAAGGGAAGAACATAGGAAATGTAGTCCTTTTAAGAGGCGGTGGCATTCAAATTGAGAGAATCACTGAGGGACAAAACAAAGTGGTAATTACTGATAGAATGTGGGCTATGCTTCTATCTTCAACAAATCTGCCCAACTTTATGATTGCTAAGACTGTCTCTGAAGAAAAAAGGGAAGAAGAAGCAAACGGTCATGTCCCTAAGTAA 594 0.3973 MWLSIFLLLCFQGLARCGKSCRLRWLNYLRPNLKRGNYTKEEEETIIKLHRHLGNRYATKHRCGVVVKGPNLSGNISGTEPLKDNRILLKAEALDYSHEARNIVVVVNELSKEITKNLVSHPVNAKCTAEGKNIGNVVLLRGGGIQIERITEGQNKVVITDRMWAMLLSSTNLPNFMIAKTVSEEKREEEANGHVPK* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0804 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 58 IPR017930 -
Gso10g0804 197 Pfam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 50 124 IPR004456 GO:0003824|GO:0046537
Gso10g0804 197 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Gso10g0804 197 Gene3D - 5 34 - -
Gso10g0804 197 Pfam Myb-like DNA-binding domain 16 44 - -
Gso10g0804 197 PANTHER COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE 55 149 IPR004456 GO:0003824|GO:0046537
Gso10g0804 197 PANTHER BNAA06G39690D PROTEIN 55 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0804 Gso-Chr10 11710421 11713698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0804 12 58 MYB Transcription Factor Family AT1G79180 74.468 1.95e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0804 - - gsj:114371405 400.593