Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0794 ATGGCGGAGTCCCAAGGTGAAGGTGGTGGTGACAGTGGCGCTTCTGGAAGCAGGCGTAGAGGCATTGCTTCCAGGCGCGCCATGGCAGCACAAACACAAGATGAAGCAATGGTGGAATCTTCACCCGCAACACCATGTGGGGCATGCAAGTTCTTGAGGAGGAGGTGCATTGAAGGGTGCATCTTTGCACCCCACTTTGGTAATGACCAGGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTTCGGTGAACCGCCGCAATGAAGCAGTGACAACAATATCATATGAGGCTCAGGCAAGGTTGTCTGATCCAGTTTATGGTTGTGTCTCCACCATCCTTGCTCTGCAACAGCAGGTGGCAACTTTGCAAGCAGAGCTAGCTATGTTGCAAACTCAGCTGATGAATAGTAGGTTTGCCTATGCAAGTGCACTTCAGACCACACAGCTACAACAACCAAATATGAATGCAGGAGCACTACAACCAGCATATTCCAACAACTCATGTGCTTCAACCAACCTTCTGAACTTGAGCAGCTTCAACAATAACACTGGCTTTGACCTTGAAATGGACACAGCACCCTCCTCATCAAGTTTGGAGCCTCTTCAACTCACAAGGTTGCCCCTATGTAAGGAAGAGGATGAAGAAGAAAGCAAGACTCAGCAAGCCTTTAACCATCGTTGA 720 0.4903 MAESQGEGGGDSGASGSRRRGIASRRAMAAQTQDEAMVESSPATPCGACKFLRRRCIEGCIFAPHFGNDQGAAKFAAVHKVFGASNVSKLLSNISVNRRNEAVTTISYEAQARLSDPVYGCVSTILALQQQVATLQAELAMLQTQLMNSRFAYASALQTTQLQQPNMNAGALQPAYSNNSCASTNLLNLSSFNNNTGFDLEMDTAPSSSSLEPLQLTRLPLCKEEDEEESKTQQAFNHR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0794 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 232 - -
Gso10g0794 239 Pfam Lateral organ boundaries (LOB) domain 45 143 IPR004883 -
Gso10g0794 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 232 - -
Gso10g0794 239 MobiDBLite consensus disorder prediction 1 43 - -
Gso10g0794 239 MobiDBLite consensus disorder prediction 218 239 - -
Gso10g0794 239 ProSiteProfiles LOB domain profile. 44 146 IPR004883 -
Gso10g0794 239 MobiDBLite consensus disorder prediction 219 239 - -
Gso10g0794 239 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0794 Gso-Chr10 11303784 11306190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0794 44 230 AS2 family AT3G03760 60.500 1.18e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso10g0794 LOB 6.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0794 - - gmx:100813769 428.713