Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0793 ATGGGCAACAACTGTGTGGGACCCAACGTCGGCAACGGCTTCCTCCAGTCCGTCACCGCGGCGGTGTGGAAAACGCGCCCGCCGGAGAACCGCCTTCCTCCGCCCAACGCCGAGGCCAAAGCCCCCGGCGGATCCGCGCCTTCCACCGCAACCACAACCACCAACACCGCCGATTCCTCGAAATCACCGGAGCCTCCTCCCGGCATGCCGGTCCAGAGCACACCGCCAGAGCCGGTCAAAATGCCTGCCGCCGCCGCCGACGCTGCGAAACCGCTCCCGCTGAAGCCCGAGAAGCCGGCCTCGAGCCACGCCATGGAGCCGGTCCCCGGCGGCGGCGATAACAACCACCAGACCAAGAAGCCCACCCACTTGAAAAGGGTATCTAGTGTGGGACTTCAAGTGGAATCCGTGTTAGGTCGAAAAACCGAAAACATGAAAGAGTTCTTTAGTTTGGGGCGCAAGTTAGGGCAAGGGCAATTCGGGACAACGTTTTTATGCGTCCAAAAGGGCACAAACAAAGACTTCGCTTGCAAATCAATCGCAAAGCGCAAATTGACAACGCAGGAGGATGTGGAAGATGTAAGGAGGGAGATTCAAATCATGCACCACTTGGCGGGTCACCCCAATGTGATACAAATTGTTGGGGCTTATGAGGATGCTGTGGCTGTGCATGTTGTCATGGAGCTTTGTGCTGGAGGAGAGTTGTTTGATAGGATCATTCAAAGGGGGCATTACACTGAGAGAAAGGCTGCTGAACTTGCTAGGCTGATTCTTAATGTTGTGGAGGCTTGTCATTCTCTTGGGGTCATGCATAGGGATTTGAAGCCTGAGAATTTTTTGTTTATTAATCATGAGGAGGAGTCACCTCTTAAGACCATTGATTTTGGACTCTCTGTGTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTATATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAACTTGACTTCATTTCTGAACCCTGGCCTAGCATATCTGAAAGTGCAAAGGATCTTGTTCGGAGGATGCTTATAAGGGACCCTAAGAAGCGGATGACAGCACATGAAGTTCTTTGCCACCCATGGGTTCAGGTTGGAGGTGTTGCACCTGATAAACCACTTGATTCTGCTGTCTTGACTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTAGAGTAATTGCTGAAAACCTGTCTGAGGAAGAAATTGCAGGACTGAAAGAAATGTTCAAGATGATAGACACGGATAACAGCGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTACTTGGCTAATGGAAGCAGCAGACGTGGATAACAGTGGTACCATAGACTATGGTGAATTCTTAGCAGCTATGCTTCATCTAAACAAGATCCAGAAGGAGGATCATCTATATGCTGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACAAAAGATGAGCTCCAACAAGCCTGCGAACAGTTCGGCCTAAAGGATTATCATCTAGATGATATAATATGTGAAATTGACAAAGATAATGATGGACGCATTGATTACAGCGAGTTTGCAGCAATGATGCAAGACACTGATTTTGGCAAAATGGGTTTTTAA 1788 0.4821 MGNNCVGPNVGNGFLQSVTAAVWKTRPPENRLPPPNAEAKAPGGSAPSTATTTTNTADSSKSPEPPPGMPVQSTPPEPVKMPAAAADAAKPLPLKPEKPASSHAMEPVPGGGDNNHQTKKPTHLKRVSSVGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILNVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEITWLMEAADVDNSGTIDYGEFLAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITKDELQQACEQFGLKDYHLDDIICEIDKDNDGRIDYSEFAAMMQDTDFGKMGF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0793 595 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 87 588 - -
Gso10g0793 595 Pfam Protein kinase domain 150 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0793 595 ProSiteProfiles Protein kinase domain profile. 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0793 595 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Gso10g0793 595 Gene3D Transferase(Phosphotransferase) domain 1 235 411 - -
Gso10g0793 595 ProSiteProfiles EF-hand calcium-binding domain profile. 522 557 IPR002048 GO:0005509
Gso10g0793 595 SMART efh_1 490 518 IPR002048 GO:0005509
Gso10g0793 595 SMART efh_1 560 588 IPR002048 GO:0005509
Gso10g0793 595 SMART efh_1 526 554 IPR002048 GO:0005509
Gso10g0793 595 SMART efh_1 454 482 IPR002048 GO:0005509
Gso10g0793 595 ProSitePatterns EF-hand calcium-binding domain. 569 581 IPR018247 -
Gso10g0793 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Gso10g0793 595 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Gso10g0793 595 ProSitePatterns Protein kinases ATP-binding region signature. 155 182 IPR017441 GO:0005524
Gso10g0793 595 Gene3D Phosphorylase Kinase; domain 1 151 234 - -
Gso10g0793 595 ProSiteProfiles EF-hand calcium-binding domain profile. 560 591 IPR002048 GO:0005509
Gso10g0793 595 MobiDBLite consensus disorder prediction 45 62 - -
Gso10g0793 595 SMART serkin_6 149 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0793 595 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Gso10g0793 595 CDD STKc_CAMK 148 406 - -
Gso10g0793 595 MobiDBLite consensus disorder prediction 63 77 - -
Gso10g0793 595 MobiDBLite consensus disorder prediction 21 128 - -
Gso10g0793 595 ProSiteProfiles EF-hand calcium-binding domain profile. 486 521 IPR002048 GO:0005509
Gso10g0793 595 SUPERFAMILY EF-hand 446 586 IPR011992 -
Gso10g0793 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 87 588 - -
Gso10g0793 595 Gene3D - 414 590 - -
Gso10g0793 595 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Gso10g0793 595 Pfam EF-hand domain pair 525 586 IPR002048 GO:0005509
Gso10g0793 595 Pfam EF-hand domain pair 455 515 IPR002048 GO:0005509
Gso10g0793 595 SUPERFAMILY Protein kinase-like (PK-like) 149 408 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0793 Gso-Chr10 11284114 11291453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0793 1 595 EF-hand Containing Proteins AT2G38910 72.637 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso10g0793 Pkinase 2.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0793 K13412 - gmx:100813232 1166.37