Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0791 ATGATTGGATGTGCTAATAATTTATCGATTGCTGTTGCTGAGTTGAGCTTTGGTCTCATATTCCATTTTCGGATCATCCCCAGCACTAAAAACAACTCTTGCATTCTCGAGTGGGTGACTATGGAGAAAGCAAATACATCACTAGTGAGAACAAAATCAGACCAACTATTAGAATCAATGGTGGCAGGCTTAAAGTCGCCACCATCGAGCGATCACTCCGCGAACGGAGTGGTGGACTCGAGGAAGTCAAGCCGATGGCTGACGGGGGCCTCGCCGGGGCGCGGCGGGAAGAACACCCACATAAGAAAGTCAAGGAGTGCTCAGATAAGTCAAATGAAGCTAGAGCTCGATGATGTGAGTAGTGGTGCTGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCTTTCTCCTTCACTGGCTTTACTATGCCTCCTGAAGAAATTGCTGACTCCAAGCCCTTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGACCTAGGACGAAGTTTCAAACGGAACCAACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAGGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGCCCCTCGGGAAGTGGAAAGACAACTCTTTTAAACCTTCTTGGGGGAAGGTTAAGCCATCCTATAAGTGGTGGTTCTATCACTTACAATGACCAACCATATTCCAAGTTCCTTAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATATGCAGCCAGGCTAAGACTACCAAAGGCATACACAAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAAAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAAGACATAGCAGAAGCAGGGAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTCCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCCTTCTTTACTTTGGAAAAGCCTCAGAAACAATGACTTACTTCCAGTCCATAGGATGTTCACCACTTATTTCCATGAACCCGGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAAGTGCAGATGGGAAATGCAGAAGCTGAAACACAAAATGGGAAGCCATCACCAGCTGTTGTACATGAGTATCTGGTGGAGGCATATGAAACTCGAGTAGCAGAAACAGAAAAGAAAAGACTAATGGTTCCTATACCTCTTGATGAAGCACTGAAGACTAAAGTGTGTTCTCATAAGAGACAATGGGGAGCAAGTTGGGATGAGCAATTTTCCATACTATTTTGGAGAGGAATCAAAGAACGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCTGTCATCTTAGGATTACTTTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGATTACTATTCTTTATTGCTGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGACATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAGTGCTTTTTCTACTTGTTGTTTATTTCATGGCCGGCCTCAGACTCAGTGTTGCACCATTTTTCCTCACGGTTCTCACTGTTTTCCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGGGCCACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGGGTCCCCATATTTTTTTCTTGGATTCGTTACATGTCATTCAACTACCACACCTACAAGCTTCTTCTCAAGGTGCAATATGAACACATCTCACCAGTCATCAATGGGATCAGAATTGATAGTGGTGCAACAGAGGTAGCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGAGAATGAAACTTCAATCTGGAGCTTAA 2337 0.4369 MIGCANNLSIAVAELSFGLIFHFRIIPSTKNNSCILEWVTMEKANTSLVRTKSDQLLESMVAGLKSPPSSDHSANGVVDSRKSSRWLTGASPGRGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKAYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASETMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETQNGKPSPAVVHEYLVEAYETRVAETEKKRLMVPIPLDEALKTKVCSHKRQWGASWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTVLTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGIRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGA* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0791 778 MobiDBLite consensus disorder prediction 66 87 - -
Gso10g0791 778 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 182 428 IPR003439 GO:0005524
Gso10g0791 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 420 IPR027417 -
Gso10g0791 778 MobiDBLite consensus disorder prediction 63 104 - -
Gso10g0791 778 Gene3D - 181 422 IPR027417 -
Gso10g0791 778 CDD ABCG_EPDR 179 410 - -
Gso10g0791 778 SMART AAA_5 214 405 IPR003593 -
Gso10g0791 778 ProSitePatterns ABC transporters family signature. 328 342 IPR017871 GO:0005524
Gso10g0791 778 Pfam ABC transporter 205 356 IPR003439 GO:0005524
Gso10g0791 778 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 772 - -
Gso10g0791 778 Pfam ABC-2 type transporter 523 732 IPR013525 GO:0016020|GO:0140359
Gso10g0791 778 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 57 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0791 Gso-Chr10 11243016 11254278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0791 204 442 Calmodulin-binding Proteins AT2G36910 30.204 9.81e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0791 K05681 - gmx:100800934 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1612 2 37154765 37174083 Gso10g0791 10 11243016 11254278 GST
Gso19g1696 19 45890485 45899746 Gso10g0791 10 11243016 11254278 PCT
Gso3g1729 3 43133068 43142570 Gso10g0791 10 11243016 11254278 PCT
Gso10g0791 10 11243016 11254278 Gso19g1696 19 45890485 45899746 PCT
Gso10g0791 10 11243016 11254278 Gso3g1729 3 43133068 43142570 PCT