Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0789 ATGATAACCACACGTGGCACTCTAGAATGTGCACACCAGACAACACTAAGGATTCTTCAGCAACTGAGTGGCTTCTCGTGGGATGCGAAAGCACTAATAGCAATAGTTGGTTTCTCTTTATATGGGGAGTTTTGGAGGCTTGATCGGGTTCAAGCTGTAGATCAATTTGGGAACTCACTGAGAAAGCTGAATCAAGTCCAAATCAGCAGAAGGGTCCCTGTAGATATGATTGATCCGGTCGCAGTTTTCAGAGAAATGCTTAATTACATCAATCTATGGGCAAAATGGTTTTCCATGGATTACAACACAGAGGCTGTGCATTCCTTGCAAGCTGGCATGCAAGATATCCCTCTTGTTGTGTACTGGACAATTGCTTCCACTGTTGCTTCTATTGGCAACCTTGTTGATATATCCTCATTAGAAGAGAGAATGGTGGAGTTGCAAGTGAAAGTGAGAGGACAAGTTTCTCAAACTGATTTATTAATCCGGTTATTGGAATTCTTAAAACTGGCTCACCACGTGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCAGAAGGGAATAATGCACTACATCAACTATCCTTCAGATTGAGGATTATTCAGGTATGTGTATGTATATCTATCTCTAGAACAATTCATGAAATATCATATAATAACTTTGTCATCAAGAAATGTCGTATAATAATGGAAGCTTAA 702 0.4031 MITTRGTLECAHQTTLRILQQLSGFSWDAKALIAIVGFSLYGEFWRLDRVQAVDQFGNSLRKLNQVQISRRVPVDMIDPVAVFREMLNYINLWAKWFSMDYNTEAVHSLQAGMQDIPLVVYWTIASTVASIGNLVDISSLEERMVELQVKVRGQVSQTDLLIRLLEFLKLAHHVSLVSMDANTHIAEGNNALHQLSFRLRIIQVCVCISISRTIHEISYNNFVIKKCRIIMEA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0789 233 Pfam Sieve element occlusion N-terminus 10 156 IPR027942 -
Gso10g0789 233 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 139 IPR039299 GO:0010088
Gso10g0789 233 PANTHER THIOREDOXIN-LIKE, SIEVE ELEMENT OCCLUSION-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0789 Gso-Chr10 11215075 11217237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0789 138 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 46.269 5.63e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0789 - - gsj:114369748 460.299