Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0745 ATGGGAAACAACTGTGTTGGATCGAGAACTTCTTCTAAAGACGTAACAAATGGCTGTTCTAATTCAAGTTCATTTTGGTGGTCACGCGGACACAAGAAAGATGCTTCTTCTCATGCACACAAAAGTGGCAACAAAAAGAGAACCAAAGCTGCGGAAACTGTTCAAAACAAGCCTCCAGAGATGGTGAAAATCGAGAGGGAGGATGTGAAGCCTCCTCATGAATCCAAAGAGACTAAACCGGCTTCGGAACCAACAACAACAAAGGAGCAGCAGCAGGCAGCAAAACCAAAGAGGCCACACAATGTGAAGAGGCTAGCAAGTGCAGGCCTTAAAACTGATTCTGTTTTGCTAAGGAAAACCGGTAACCTTAAGGAGTTTTACAATTTGGGACCGAAGCTAGGACAAGGCCAATTTGGAACCACTTTCCTTTGTGTGGAGAAGATCAGTGGGAAAGAGTATGCTTGCAAGTCAATACTGAAGAGGAAGCTTTTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGCAGGGAGTCCTAATGTGATCTCCATCAAGGAGGCTTTTGAGGATGCTGTCGCGGTTCATGTTGTTATGGAGCTGTGTGCAGGGGGTGAGCTTTTTGATAGGATTGTCGAAAGAGGACATTACACTGAGAGAAAGGCTGCTAAGCTTGCAAGGACTATAGTTGGTGTCATTGAGTCTTGCCACTCCCTTGGAGTCATGCATAGGGATCTCAAGCCTGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTTAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTTGGTGATGTAGTAGGAAGTCCTTATTACGTAGCACCTGAAGTTCTACGTAAGCGTTACGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATAATCTACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGAGAATCGGAGCAAGACATATTCGAGGCGATTTTGCATTCCGAACTTGATTTCTCATCGGATCCTTGGCCTGCTATATCTGAAAGTGCAAAAGACTTGGTTAGGAAGATTCTTGTCAGAGATCCTACTAAAAGGATGACAGCTTATGAAGTTCTTCGTCACCCCTGGATTCATGTTGATGGAGCTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAATTTTATGCAATGAACAAACTCAAGAAAATGGCTCTAAGAGTTATAGCACAAAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAAGTTTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAATCAGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGGTTGAAAGAGAAGATCATTTAGTTGCAGCATTTGCTTATTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAGCAAGCTTGTGAAGAATTTGGCATTGGAGATGTTCGCTTGGAGGAAATGATCCGAGAAGCTGATCAAGATAATGATGGACGAATAGACTACAATGAATTTGTTGCTATGATGCAGAAAGGCAATGCAGATTTGGGTAAGAGGGTTCGAAAGGGTAGCACTAGTTTTAGAGTTGGATTTAGGGAAGCACTACCTGTATGTTAA 1779 0.4255 MGNNCVGSRTSSKDVTNGCSNSSSFWWSRGHKKDASSHAHKSGNKKRTKAAETVQNKPPEMVKIEREDVKPPHESKETKPASEPTTTKEQQQAAKPKRPHNVKRLASAGLKTDSVLLRKTGNLKEFYNLGPKLGQGQFGTTFLCVEKISGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFGDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWGESEQDIFEAILHSELDFSSDPWPAISESAKDLVRKILVRDPTKRMTAYEVLRHPWIHVDGAAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQSADVDNSGTIDYGEFIAATLHLNKVEREDHLVAAFAYFDKDGSGYITQDELQQACEEFGIGDVRLEEMIREADQDNDGRIDYNEFVAMMQKGNADLGKRVRKGSTSFRVGFREALPVC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0745 592 PANTHER CALCIUM-DEPENDENT KINASE 31 576 - -
Gso10g0745 592 SMART efh_1 432 460 IPR002048 GO:0005509
Gso10g0745 592 SMART efh_1 538 566 IPR002048 GO:0005509
Gso10g0745 592 SMART efh_1 504 532 IPR002048 GO:0005509
Gso10g0745 592 SMART efh_1 468 496 IPR002048 GO:0005509
Gso10g0745 592 MobiDBLite consensus disorder prediction 1 107 - -
Gso10g0745 592 ProSitePatterns Protein kinases ATP-binding region signature. 133 160 IPR017441 GO:0005524
Gso10g0745 592 Gene3D - 392 569 - -
Gso10g0745 592 ProSiteProfiles EF-hand calcium-binding domain profile. 500 535 IPR002048 GO:0005509
Gso10g0745 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 576 - -
Gso10g0745 592 CDD EFh 504 564 IPR002048 GO:0005509
Gso10g0745 592 ProSitePatterns EF-hand calcium-binding domain. 547 559 IPR018247 -
Gso10g0745 592 MobiDBLite consensus disorder prediction 1 30 - -
Gso10g0745 592 Pfam Protein kinase domain 127 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0745 592 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Gso10g0745 592 Pfam EF-hand domain pair 433 493 IPR002048 GO:0005509
Gso10g0745 592 Pfam EF-hand domain pair 505 564 IPR002048 GO:0005509
Gso10g0745 592 Gene3D Transferase(Phosphotransferase) domain 1 213 391 - -
Gso10g0745 592 MobiDBLite consensus disorder prediction 46 83 - -
Gso10g0745 592 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Gso10g0745 592 CDD EFh 433 492 IPR002048 GO:0005509
Gso10g0745 592 Gene3D Phosphorylase Kinase; domain 1 130 212 - -
Gso10g0745 592 SMART serkin_6 127 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0745 592 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Gso10g0745 592 CDD STKc_CAMK 126 384 - -
Gso10g0745 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Gso10g0745 592 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Gso10g0745 592 SUPERFAMILY EF-hand 414 565 IPR011992 -
Gso10g0745 592 SUPERFAMILY Protein kinase-like (PK-like) 127 386 IPR011009 -
Gso10g0745 592 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Gso10g0745 592 ProSiteProfiles Protein kinase domain profile. 127 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0745 592 ProSiteProfiles EF-hand calcium-binding domain profile. 538 569 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0745 Gso-Chr10 10475735 10481433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0745 1 577 EF-hand Containing Proteins AT3G10660 66.458 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso10g0745 Pkinase 1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0745 K13412 - gmx:100800415 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1638 2 38585037 38589690 Gso10g0745 10 10475735 10481433 GST
Gso10g0745 10 10475735 10481433 Gso19g1690 19 45840754 45845220 PCT
Gso10g0745 10 10475735 10481433 Gso3g1723 3 43083501 43087961 PCT