Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g0745 | ATGGGAAACAACTGTGTTGGATCGAGAACTTCTTCTAAAGACGTAACAAATGGCTGTTCTAATTCAAGTTCATTTTGGTGGTCACGCGGACACAAGAAAGATGCTTCTTCTCATGCACACAAAAGTGGCAACAAAAAGAGAACCAAAGCTGCGGAAACTGTTCAAAACAAGCCTCCAGAGATGGTGAAAATCGAGAGGGAGGATGTGAAGCCTCCTCATGAATCCAAAGAGACTAAACCGGCTTCGGAACCAACAACAACAAAGGAGCAGCAGCAGGCAGCAAAACCAAAGAGGCCACACAATGTGAAGAGGCTAGCAAGTGCAGGCCTTAAAACTGATTCTGTTTTGCTAAGGAAAACCGGTAACCTTAAGGAGTTTTACAATTTGGGACCGAAGCTAGGACAAGGCCAATTTGGAACCACTTTCCTTTGTGTGGAGAAGATCAGTGGGAAAGAGTATGCTTGCAAGTCAATACTGAAGAGGAAGCTTTTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGCAGGGAGTCCTAATGTGATCTCCATCAAGGAGGCTTTTGAGGATGCTGTCGCGGTTCATGTTGTTATGGAGCTGTGTGCAGGGGGTGAGCTTTTTGATAGGATTGTCGAAAGAGGACATTACACTGAGAGAAAGGCTGCTAAGCTTGCAAGGACTATAGTTGGTGTCATTGAGTCTTGCCACTCCCTTGGAGTCATGCATAGGGATCTCAAGCCTGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTTAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTTGGTGATGTAGTAGGAAGTCCTTATTACGTAGCACCTGAAGTTCTACGTAAGCGTTACGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATAATCTACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGAGAATCGGAGCAAGACATATTCGAGGCGATTTTGCATTCCGAACTTGATTTCTCATCGGATCCTTGGCCTGCTATATCTGAAAGTGCAAAAGACTTGGTTAGGAAGATTCTTGTCAGAGATCCTACTAAAAGGATGACAGCTTATGAAGTTCTTCGTCACCCCTGGATTCATGTTGATGGAGCTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAATTTTATGCAATGAACAAACTCAAGAAAATGGCTCTAAGAGTTATAGCACAAAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAAGTTTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAATCAGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGGTTGAAAGAGAAGATCATTTAGTTGCAGCATTTGCTTATTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAGCAAGCTTGTGAAGAATTTGGCATTGGAGATGTTCGCTTGGAGGAAATGATCCGAGAAGCTGATCAAGATAATGATGGACGAATAGACTACAATGAATTTGTTGCTATGATGCAGAAAGGCAATGCAGATTTGGGTAAGAGGGTTCGAAAGGGTAGCACTAGTTTTAGAGTTGGATTTAGGGAAGCACTACCTGTATGTTAA | 1779 | 0.4255 | MGNNCVGSRTSSKDVTNGCSNSSSFWWSRGHKKDASSHAHKSGNKKRTKAAETVQNKPPEMVKIEREDVKPPHESKETKPASEPTTTKEQQQAAKPKRPHNVKRLASAGLKTDSVLLRKTGNLKEFYNLGPKLGQGQFGTTFLCVEKISGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFGDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWGESEQDIFEAILHSELDFSSDPWPAISESAKDLVRKILVRDPTKRMTAYEVLRHPWIHVDGAAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQSADVDNSGTIDYGEFIAATLHLNKVEREDHLVAAFAYFDKDGSGYITQDELQQACEEFGIGDVRLEEMIREADQDNDGRIDYNEFVAMMQKGNADLGKRVRKGSTSFRVGFREALPVC* | 593 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g0745 | 592 | PANTHER | CALCIUM-DEPENDENT KINASE | 31 | 576 | - | - | |
Gso10g0745 | 592 | SMART | efh_1 | 432 | 460 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | SMART | efh_1 | 538 | 566 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | SMART | efh_1 | 504 | 532 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | SMART | efh_1 | 468 | 496 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | MobiDBLite | consensus disorder prediction | 1 | 107 | - | - | |
Gso10g0745 | 592 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 160 | IPR017441 | GO:0005524 | |
Gso10g0745 | 592 | Gene3D | - | 392 | 569 | - | - | |
Gso10g0745 | 592 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 500 | 535 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 31 | 576 | - | - | |
Gso10g0745 | 592 | CDD | EFh | 504 | 564 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | ProSitePatterns | EF-hand calcium-binding domain. | 547 | 559 | IPR018247 | - | |
Gso10g0745 | 592 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Gso10g0745 | 592 | Pfam | Protein kinase domain | 127 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g0745 | 592 | ProSitePatterns | EF-hand calcium-binding domain. | 441 | 453 | IPR018247 | - | |
Gso10g0745 | 592 | Pfam | EF-hand domain pair | 433 | 493 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | Pfam | EF-hand domain pair | 505 | 564 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | Gene3D | Transferase(Phosphotransferase) domain 1 | 213 | 391 | - | - | |
Gso10g0745 | 592 | MobiDBLite | consensus disorder prediction | 46 | 83 | - | - | |
Gso10g0745 | 592 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 464 | 499 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | CDD | EFh | 433 | 492 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | Gene3D | Phosphorylase Kinase; domain 1 | 130 | 212 | - | - | |
Gso10g0745 | 592 | SMART | serkin_6 | 127 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g0745 | 592 | ProSitePatterns | EF-hand calcium-binding domain. | 477 | 489 | IPR018247 | - | |
Gso10g0745 | 592 | CDD | STKc_CAMK | 126 | 384 | - | - | |
Gso10g0745 | 592 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Gso10g0745 | 592 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 428 | 463 | IPR002048 | GO:0005509 | |
Gso10g0745 | 592 | SUPERFAMILY | EF-hand | 414 | 565 | IPR011992 | - | |
Gso10g0745 | 592 | SUPERFAMILY | Protein kinase-like (PK-like) | 127 | 386 | IPR011009 | - | |
Gso10g0745 | 592 | ProSitePatterns | EF-hand calcium-binding domain. | 513 | 525 | IPR018247 | - | |
Gso10g0745 | 592 | ProSiteProfiles | Protein kinase domain profile. | 127 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g0745 | 592 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 538 | 569 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g0745 | Gso-Chr10 | 10475735 | 10481433 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g0745 | 1 | 577 | EF-hand Containing Proteins | AT3G10660 | 66.458 | 0.0 | 851 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Gso10g0745 | Pkinase | 1e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g0745 | K13412 | - | gmx:100800415 | 1188.71 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso2g1638 | 2 | 38585037 | 38589690 | Gso10g0745 | 10 | 10475735 | 10481433 | GST | |
Gso10g0745 | 10 | 10475735 | 10481433 | Gso19g1690 | 19 | 45840754 | 45845220 | PCT | |
Gso10g0745 | 10 | 10475735 | 10481433 | Gso3g1723 | 3 | 43083501 | 43087961 | PCT |