Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0715 ATGGCGACATATTTTCATAGTAACTCGGAAATTCAAGCTGGTGCTGACGGCCTTCAAACCCTCGTACTAATGAACCCCGGGTATGTCCAATACTCTGACACGCCGCCACCACCGCACGGCGGAAACCTCGTATTCCTCAACTCCGCCGCCGGAAACGCCTCCCTACAAAGTCTCCCCCACGCGCCGCCCCCCCACACGCAGCAATTTGTCGGTGTCCCACTCTCGGCCGCCGCGCATGAGCCGCCGGCGTCCATGCACCACGACGTCTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTATAACCTCTGGAACACAATTGAGCACAACGCGGCGGCGCGTGAGGCCCCACGCGCCACCCAGGGGCTGTCGCTGAGTCTGCACGGGGACCACATGCGCGCGTCACCGTCCTCGGCTTCCGGGGCCTCCAACGGCGGCGGCGTGGCGGGGATTCAGAGCGTGCTGTTGAGCTCCAAGTACTTGAAGGCCACGCAGGAGCTTCTGGATGAGGTTGTTAATGTTAACGGCGGAATTAGGGTTGAACACGCGAAGAAGCTGAACTTCGAAAAAACTAAGGTTGTTGGAGAATCATCAACCGCCGCTAGTGGCGACGGTTCCGTTGGTGGAGAGGGAAGTGGGAAACGTAGCTCTGAGTTGTCAACTACGGAGAGACAAGAAATTCAGATAAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAACCAGATGAAGATAGTGATATCCTCATTTGAGCAAGCTGCTGGAATAGGCTCAGCAAGAACGTACACTGCGCTTGCACTGCAAACAATTTCGAAGCAATTTCGGTGTTTGAAGGATGCAATAACGGGGCAAATCAGAGCTGCAAACAAGAGTTTGGGAGAAGAGGATTGTTTTGGTGCTAAAATTGAAGGATCTAGGCTCAAATATGTGGACCATCATCTAAGGCAACAGAGGGCTATTCAGCAACTGGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCGGTTTCTGTTCTGCGTGCTTGGCTCTTTGAACACTTTCTTCATCCTTACCCCAAGGACTCAGACAAGCACATGCTTGCTAAACAAACAGGGCTTACCAGGAGCCAGGTTTCAAATTGGTTCATTAATGCTAGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGAGCATGAACTAAATGGTTCTGAGGAGAAATCAAGCAAGAGTGGTGAAGATCCTGCTACAAAAACCACAAGTCCACAAGAGAAACGTACTTCCTCTGAAATTGAATCCAAAAGTTTCAATTCCAAACAAGATGTTTCCAAACAAAGCCAGAACACTCCAATTCTTCCAACTTCTCCACCATCAATATCACCTATAGGGGGAAGTGTTAAGAACCAATCAGGATTCAGTTTCATGGGGTCATCAGAACTTGATGGAATCACACAAGGAAGTCCTAAAAAACCAAGGAACCATGAAATTCTTCACTCTCCAAACCGTGTCCCTTCAATCAACATGGATGTGAAAGCCAATGAAGCAAACAATGAGCAACAACTCTCAATGGATCACGAGAGGCAGAATAATAGGGATAGCTACTCCTTCATGGGGAACCAAACAAACTTCATTAGTGGCTTTGGACAATACCCTATTGAGGAAATTGGTAGGTTTGATGCTGAGCAATTCACACCAAGGTTTTCAGGTAAGAATGGAGTTTCCCTCACTCTTGGTCTTCCTCATTGTGACACATTGTCAGGAACACACCAAAGTTTTCTCCCAAACCAAAACATTCAACTTGGAAGAGGGTTGGACATTGGTGAACCAAACCAGTTTGGTGCCTTGAACAATTCCAATTCTCACAATTCAGCAGCATTTGAGAGTATCAACATGCAGAACCCGAAGAGGTTTGCTGCACAATTGCTACCAGACTTTGTGGCCTAA 1986 0.4874 MATYFHSNSEIQAGADGLQTLVLMNPGYVQYSDTPPPPHGGNLVFLNSAAGNASLQSLPHAPPPHTQQFVGVPLSAAAHEPPASMHHDVSALHGFLPRMQYNLWNTIEHNAAAREAPRATQGLSLSLHGDHMRASPSSASGASNGGGVAGIQSVLLSSKYLKATQELLDEVVNVNGGIRVEHAKKLNFEKTKVVGESSTAASGDGSVGGEGSGKRSSELSTTERQEIQIKKAKLINMLDEVEQRYRQYHNQMKIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEDCFGAKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNGSEEKSSKSGEDPATKTTSPQEKRTSSEIESKSFNSKQDVSKQSQNTPILPTSPPSISPIGGSVKNQSGFSFMGSSELDGITQGSPKKPRNHEILHSPNRVPSINMDVKANEANNEQQLSMDHERQNNRDSYSFMGNQTNFISGFGQYPIEEIGRFDAEQFTPRFSGKNGVSLTLGLPHCDTLSGTHQSFLPNQNIQLGRGLDIGEPNQFGALNNSNSHNSAAFESINMQNPKRFAAQLLPDFVA* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0715 661 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 613 - -
Gso10g0715 661 SUPERFAMILY Homeodomain-like 341 407 IPR009057 -
Gso10g0715 661 MobiDBLite consensus disorder prediction 447 498 - -
Gso10g0715 661 ProSiteProfiles 'Homeobox' domain profile. 337 400 IPR001356 GO:0003677
Gso10g0715 661 SMART HOX_1 340 404 IPR001356 GO:0003677
Gso10g0715 661 MobiDBLite consensus disorder prediction 413 520 - -
Gso10g0715 661 Pfam Associated with HOX 154 291 IPR006563 -
Gso10g0715 661 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 613 - -
Gso10g0715 661 MobiDBLite consensus disorder prediction 194 224 - -
Gso10g0715 661 Gene3D - 336 413 - -
Gso10g0715 661 MobiDBLite consensus disorder prediction 413 427 - -
Gso10g0715 661 SMART prehox3 149 292 IPR006563 -
Gso10g0715 661 Pfam Homeobox KN domain 357 396 IPR008422 GO:0003677|GO:0006355
Gso10g0715 661 CDD homeodomain 340 401 IPR001356 GO:0003677
Gso10g0715 661 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0715 Gso-Chr10 9805173 9810805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0715 1 661 Homeobox Transcription Factor Family AT2G35940 49.667 3.96e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gso10g0715 POX 1.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0715 - - gmx:100791773 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0056 2 685410 687734 Gso10g0715 10 9805173 9810805 GST
Gso3g1704 3 42902495 42907083 Gso10g0715 10 9805173 9810805 PCT
Gso10g0715 10 9805173 9810805 Gso3g1704 3 42902495 42907083 PCT