Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0708 ATGATGAGGCTGAACTTTCTCCTTTGTTTCTGTTTCTTCACTCTCGTCGTTTCCGAAACCGACCCGAACGACGTGAAGATTCTAAACACTTTCAGAAGAGGGTTGAACAACTCAGAGCTCTTACCATGGCCCGAAGAAGGAGGAGACCCGTGCGGGAGCCCACCGTGGAAATACATCTTCTGCAACGGCAACAGAGTCGCTCAAATTCAGACCAAGAACCTGGGTCTGGTGGGCCCACTTCCTCAAAACCTCAACCAACTCGTCATGCTCGAGAATCTGGGCTTACAGAACAACAACCTCAACGGTCCCTTGCCTTCCTTCAAGGGCTTAAATAACCTTAAATACATTTTTCTCGGTCGCAACGACTTCGATTCAATCCCTTTAGATTTCTTCGAGGGACTGAAGAGTCTCGAGGTCTTGGCTTTGGATTACAACGAGAAGCTTAATGCAAGTAGTGGCGGCTGGAGTTTTCCGGCAGCGTTGGCGGATTCGGCGCAGCTGAGGAACTTGAGTTGCATGAGCTGTAATCTGGTGGGCCCCATTCCGGGGTTCCTCGGGGACATGGCGTCGCTGTCGGTGTTGCTGCTGTCGGGAAACAACTTAACCGGCGAGATTCCGGCGACGCTGAACGCCGTGCCGGCGTTGCAGGTTTTGTGGCTGAACAACCAGCGTGGTGAGGGACTCACTGGGAAGATTGATGTCTTGGCGAGTATGATTTCGTTGACGAGTTTGTGGCTTCACGGGAATAAGTTTGAAGGGAGTGTGCCAGATAGTATTGCGGATTTGGTTTCTCTAAAGGATTTGGATCTCAACGGGAATGAGTTTGTTGGGTTGATTCCGAGTGGTTTGGGTGGAATGAAGTTGGATAGATTGGATTTGAATAACAACCATTTCGTGGGTCCGATCCCGGATTTCGCAGCGAGTAAAGTGAGCTTTGAGAACAATGAATTTTGTGTGGCCAAACCCGGGGTTATGTGTGGTTTTGAGGTGATGGTGTTGTTGGAGTTTCTTGGAGGGTTGGGGTATCCTCGGATTTTGGTTGATGAGTGGAGTGGGAATGACCCTTGTGATGGGCCATGGTTGGGGATAAGGTGCAATGGGGATGGGAAGGTGGACATGATTCTTTTGGAAAAGTTTAATATTAGTGGGACTTTGAGTCCTTCTGTTGCAAAGTTGGATTCTCTTGTTGAGATAAGGTTGGGAGGTAATGATATCAGTGGTGGGATACCTAGTAATTGGACTAGTTTGAGATCTTTGACATTGTTGGATCTGAGTGGGAACAACATTTCAGGTCCCTTGCCGAGTTTTAGGAAAGGGTTGAAGCTTGTGATTGATGAGAATCCTCATGTAAGTGCTCCAGAAGGTTCTCTTCCTTCACCAGTGAGTAGTTCGGGTTCCGGTTCAGGTTCGTGGTCTACGAAGGGTGAATCTCCTCCAGCTGATAAGCATAATCCTAATCCATCTGGAGATTCTAGTCCTAATCCAAAGTCTAGTAGTTCTTTTGAGTCGAATAAGTCTTCCATTGGGAAAAAATTGGTTCCAATTGTGGCTCCTATCGCAGGTGTTGCAGCTGTGGCTTTTGTGCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAAAAAGGGTGTCTCTGAGGGTCCAGGGTCATTGGTGATTCACCCTAGGGATGCTTCTGATCTGGACAATGTGCTGAAGATTGTTGTTGCTAACAACAGCAATGGGAGCGTTTCCACAGTGACTGGCAGTGGGTCTGGGATTACGACTGGAAGTAGCGAGTCTCGTGTTATTGAAGCTGGGAACCTGGTGATATCGGTTCAGGTTCTTCGAAATGTGACCAAGAATTTTGCGCGGGAGAACGAGGTTGGACGCGGTGGATTTGGGGTTGTTTACAAGGGGGAATTGGAAGATGGGACTAAGATTGCGGTAAAACGAATGGAATCCGGTGTGATTACGAGCAAGGCCTTGGATGAATTCCAGTCTGAGATTGCTGTTCTATCTAAAGTCCGGCACCGGCATTTGGTGTCTCTTTTGGGTTATTCAGTTGAAGGTAATGAAAGGATTCTAGTTTATGAGTATATGCCACAAGGGGCTCTTAGTATGCATCTTTTCCATTGGAAGAGCTTAAAACTGGAGCCACTGTCTTGGAAGAGGAGGCTCAACATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATAGTCTGGCTCACCAAATCTTCATTCACAGAGATCTTAAGTCATCAAATATTTTGCTTGGGGATGATTTTAGAGCAAAAGTCTCAGACTTTGGGTTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTGACCAGGCTTGCTGGTACATTTGGATACTTGGCACCGGAATATGCAGTGACAGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGTGTTGTCCTAATGGAGCTGCTAACTGGATTAATGGCACTTGACGAGGATCGACCCGAGGAAACCCAATACTTGGCGTCGTGGTTCTGGCATATAAAATCAGACAAGGAGAAACTAATGTCTGCTATTGACCCGGCCCTCGACATAAAGGAAGAAATGTTCGACGTTGTCTCCATCATTGCTGAGCTAGCTGGGCACTGCTCTGCCAGAGAACCAAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTTCACCGCTTGTTCAAAAATGGAAACCATTAGATGATGAGACTGAGGAGTATTCCGGCATAGATTACAGTCTTCCCCTGAACCAAATGGTGAAGGATTGGCAGGAGACAGAAGGAAAGGACTTAAGCTATGTGGACCTACAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGGTTTGCCGAGTCTTTCACTTCTGTCGATGGCCGGTGA 2886 0.4702 MMRLNFLLCFCFFTLVVSETDPNDVKILNTFRRGLNNSELLPWPEEGGDPCGSPPWKYIFCNGNRVAQIQTKNLGLVGPLPQNLNQLVMLENLGLQNNNLNGPLPSFKGLNNLKYIFLGRNDFDSIPLDFFEGLKSLEVLALDYNEKLNASSGGWSFPAALADSAQLRNLSCMSCNLVGPIPGFLGDMASLSVLLLSGNNLTGEIPATLNAVPALQVLWLNNQRGEGLTGKIDVLASMISLTSLWLHGNKFEGSVPDSIADLVSLKDLDLNGNEFVGLIPSGLGGMKLDRLDLNNNHFVGPIPDFAASKVSFENNEFCVAKPGVMCGFEVMVLLEFLGGLGYPRILVDEWSGNDPCDGPWLGIRCNGDGKVDMILLEKFNISGTLSPSVAKLDSLVEIRLGGNDISGGIPSNWTSLRSLTLLDLSGNNISGPLPSFRKGLKLVIDENPHVSAPEGSLPSPVSSSGSGSGSWSTKGESPPADKHNPNPSGDSSPNPKSSSSFESNKSSIGKKLVPIVAPIAGVAAVAFVLIPLYVYCFRKKKGVSEGPGSLVIHPRDASDLDNVLKIVVANNSNGSVSTVTGSGSGITTGSSESRVIEAGNLVISVQVLRNVTKNFARENEVGRGGFGVVYKGELEDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSLKLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEETQYLASWFWHIKSDKEKLMSAIDPALDIKEEMFDVVSIIAELAGHCSAREPNQRPDMSHAVNVLSPLVQKWKPLDDETEEYSGIDYSLPLNQMVKDWQETEGKDLSYVDLQDSKSSIPARPTGFAESFTSVDGR* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0708 961 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Gso10g0708 961 MobiDBLite consensus disorder prediction 942 961 - -
Gso10g0708 961 MobiDBLite consensus disorder prediction 451 503 - -
Gso10g0708 961 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Gso10g0708 961 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Gso10g0708 961 Gene3D Transferase(Phosphotransferase) domain 1 693 912 - -
Gso10g0708 961 SMART LRR_typ_2 416 438 IPR003591 -
Gso10g0708 961 SMART LRR_typ_2 262 285 IPR003591 -
Gso10g0708 961 SMART LRR_typ_2 188 212 IPR003591 -
Gso10g0708 961 SMART LRR_typ_2 238 261 IPR003591 -
Gso10g0708 961 SMART LRR_typ_2 110 133 IPR003591 -
Gso10g0708 961 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 961 - -
Gso10g0708 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Gso10g0708 961 Gene3D Ribonuclease Inhibitor 21 325 IPR032675 -
Gso10g0708 961 MobiDBLite consensus disorder prediction 456 503 - -
Gso10g0708 961 SUPERFAMILY L domain-like 20 304 - -
Gso10g0708 961 CDD STKc_IRAK 621 894 - -
Gso10g0708 961 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Gso10g0708 961 Gene3D Phosphorylase Kinase; domain 1 583 692 - -
Gso10g0708 961 PANTHER OSJNBA0070M12.3 PROTEIN 4 961 - -
Gso10g0708 961 SUPERFAMILY L domain-like 329 441 - -
Gso10g0708 961 Pfam Protein tyrosine and serine/threonine kinase 618 890 IPR001245 GO:0004672|GO:0006468
Gso10g0708 961 ProSiteProfiles Protein kinase domain profile. 615 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0708 961 SMART serkin_6 615 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0708 961 SUPERFAMILY Protein kinase-like (PK-like) 594 900 IPR011009 -
Gso10g0708 961 Pfam Leucine rich repeat 90 145 IPR001611 GO:0005515
Gso10g0708 961 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0708 Gso-Chr10 9685844 9690294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0708 76 895 Receptor kinase-like Gene Family AT5G07180 29.516 1.50e-81 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso10g0708 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0708 - - gmx:100781857 1774.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1672 2 39627843 39631722 Gso10g0708 10 9685844 9690294 GST
Gso3g1701 3 42843470 42847309 Gso10g0708 10 9685844 9690294 PCT
Gso10g0708 10 9685844 9690294 Gso3g1701 3 42843470 42847309 PCT