Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0693 ATGGCTGATAAGCAATCCCAACTAAACGGTGCGTATTACGGCCCCGCAATCCCTCCATCGGAGCTGCCACGTCACCACCACCGTGGCCGACGCTGCTGCTGTTGCCTCTTCAGCTTCTTCTGGAAGCTTCTCCTTGCCATCGTCGTCTTCCTCGTTGTCGTATTCCTCGTCTTCTGGGCTGTGGTCCAGCCACGCACCTTCAAGCTCCATGTCACCGACGCCAAACTCACCCAATTCAACCTCACCACCAACAACAATAATAACATTAACATGCTCCGCTACAATCTCGTTCTCAATCTCACTGCACGAAACCCTAACAAAAAACTCAACATCTACTACGACCAAGTGGAGGGCCACGTGTCCTACGAGGGGATGAGGTTCGCCTCAGCGGACCTGATCACATGGCGAAACTCCTTCCGCCAATACACAAAGAGCACGAACAACATGAGCGGGGTTTTCACGGGGCAGCACGGGTTGGTGTTCGATGGCGATCACGTGAAGGATTTCGAAAAAGATGAGAGAGGTGGGGTTTTTGATATTGATGTGAAGCTTTACTTTAACATTAGGTTTAGGCTTGGTGACTTCATAGGAAGTAGCTCAAGGGTTAGGGCGAAGTGCGAGCTTCAGGTTCCTTTGGTTTCGAGGGGAGTGTTTCTTCCCACCAGGTGCCATGTCAAATTCTGA 684 0.5117 MADKQSQLNGAYYGPAIPPSELPRHHHRGRRCCCCLFSFFWKLLLAIVVFLVVVFLVFWAVVQPRTFKLHVTDAKLTQFNLTTNNNNNINMLRYNLVLNLTARNPNKKLNIYYDQVEGHVSYEGMRFASADLITWRNSFRQYTKSTNNMSGVFTGQHGLVFDGDHVKDFEKDERGGVFDIDVKLYFNIRFRLGDFIGSSSRVRAKCELQVPLVSRGVFLPTRCHVKF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0693 227 Pfam Late embryogenesis abundant protein 100 207 IPR004864 -
Gso10g0693 227 PANTHER OS05G0367900 PROTEIN 25 225 IPR044839 GO:0098542
Gso10g0693 227 PANTHER PROTEIN, PUTATIVE-RELATED 25 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0693 Gso-Chr10 9277592 9278521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0693 61 213 SNARE and Associated Proteins AT1G32270 33.548 2.19e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0693 - - gmx:100788062 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1666 19 45568706 45569647 Gso10g0693 10 9277592 9278521 PCT
Gso3g1697 3 42816678 42817677 Gso10g0693 10 9277592 9278521 PCT
Gso10g0693 10 9277592 9278521 Gso19g1666 19 45568706 45569647 PCT
Gso10g0693 10 9277592 9278521 Gso3g1697 3 42816678 42817677 PCT