Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0687 ATGTCCCATCTAAACGGCGCCTACTACGGCCCCGCCGTTCCCCCGCCGAAATCCTACCACCGTCCCTCCCACGGCGGCGGCGGCGGCGGCCGCGACGGCTGCTGCTGCGGCTGCCTGAGCTGCTTCTGTGGCTGCATCTTCGACTGCATCCTCGGCCTAATCTGCAAGATCCTGACCACAGTCATCATAATCCTGGCAGTTCTCGCTTTTCTGTTCTGGTTTATCGTGCGCCCCAACGTGATCAAATTCCACGTCACAGACGCCTCCCTCACGCGCTTCGACTACACCACCAACAACACTCTCCACTATGACCTCACTCTCAACGTGTCGATCCGCAACCCGAACCGCAGGGTCGGCGTCTACTACGATCAAATCGAAGCGCTCGCGCTGTACGAGGATGTTTTGTTCGGGAACCTGACATTGGGTTCTTTCTACCAGCACCACAAGAACACCACCTTCGTGAGTCCCATTTTCAAGGGCCAGCGCGTGACTCCACTCGCCAAGGTCCAGGTTTCGGAGTTTGACAAGGAAAAGGGTTCTGGGGTTTACACCATAGATTTGAAGCTCTTCATGACGGTTCGGTTCAAGTTCTTGCTGTTCAAGAGTGGGAGTTTGAAGCCCAAGATTCGGTGTGCGTTGCACGTGCCACTGAAATCGCGTAACGCAACAACCTCTCCGGACGCTGCGTTTCAACCCACTGAGTGCGATTGGGATTACGGGAAAAAGTGGTGGATCCATTAG 741 0.5574 MSHLNGAYYGPAVPPPKSYHRPSHGGGGGGRDGCCCGCLSCFCGCIFDCILGLICKILTTVIIILAVLAFLFWFIVRPNVIKFHVTDASLTRFDYTTNNTLHYDLTLNVSIRNPNRRVGVYYDQIEALALYEDVLFGNLTLGSFYQHHKNTTFVSPIFKGQRVTPLAKVQVSEFDKEKGSGVYTIDLKLFMTVRFKFLLFKSGSLKPKIRCALHVPLKSRNATTSPDAAFQPTECDWDYGKKWWIH* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0687 246 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 16 240 - -
Gso10g0687 246 Pfam Late embryogenesis abundant protein 108 211 IPR004864 -
Gso10g0687 246 PANTHER OS05G0367900 PROTEIN 16 240 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0687 Gso-Chr10 9088381 9089426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0687 75 223 SNARE and Associated Proteins AT1G32270 39.073 9.67e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0687 - - gmx:100815702 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1678 2 39836056 39837100 Gso10g0687 10 9088381 9089426 GST
Gso19g1664 19 45561445 45562367 Gso10g0687 10 9088381 9089426 PCT
Gso3g1695 3 42808087 42809160 Gso10g0687 10 9088381 9089426 PCT
Gso10g0687 10 9088381 9089426 Gso19g1664 19 45561445 45562367 PCT
Gso10g0687 10 9088381 9089426 Gso3g1695 3 42808087 42809160 PCT