Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0670 ATGAAGTTTTTTAATCTTCTGAAAAGCAGACATGTTAGATCCTCCTCCTCTTCTTCATCAAGGGCCTGGCCATCCTGCCACCAACCCAAAACCCTCTCTTTTAGAGTCACCACCACCAAAATTAACAATGAGGAAGACAATAACAACAACAACAACGTCGTCAACGACGTTGTTTTGAAAGACATTAACTCAGCGTTAGTGTCACAAACTCCAGAATCGTTTTTCACCGAGTCTCCGGACTCGGCAAGCTTCTCAACAACTTCCGAGTTGTCTCGTGGCATGGACCCCATAGAGGCGGTGATTCGCGGCCTGCGTTCGGATCGACTTTTCTTCGATCCGGACGAGGCAAGCTGCATATTAGAGGCCAAACCGACGACGACGAGCCTAGAGCCTTTCAAAAACAGCGTCGTTTTGACGATGGATTCAGAGGACCCTCACGTGGATTTCCGCAAATCCATGGAGGAGATGGTGGAGACTCTCGGCGTCGAAGACTGGGAGAGTCTCGAGGACCTTCTGTGCTGGTACTTGCAGGCAAACACCAAGAGCAATCACGAGTATATCATTGGAGCATTCGTTGATTTGTTGTTCGATCTGGCTGTTCCAAATTCACCTTGTTCACAAGACGATGACGAAAATCTTCATTCTCACTCTCATTCTCGTCCTTCTTCTCCTTTATCGTTTTATAACTCTTCTTCTTCTCCCTCATCCTCTTGCAGCACTCCCTATTGTATAAAAGGTGAAGTGGAAGAGGAAGAGGTTGGTGCTTGTAGTTCTTTTTTTTCTTTAGCGCAGCTTAATAATTAA 804 0.4614 MKFFNLLKSRHVRSSSSSSSRAWPSCHQPKTLSFRVTTTKINNEEDNNNNNNVVNDVVLKDINSALVSQTPESFFTESPDSASFSTTSELSRGMDPIEAVIRGLRSDRLFFDPDEASCILEAKPTTTSLEPFKNSVVLTMDSEDPHVDFRKSMEEMVETLGVEDWESLEDLLCWYLQANTKSNHEYIIGAFVDLLFDLAVPNSPCSQDDDENLHSHSHSRPSSPLSFYNSSSSPSSSCSTPYCIKGEVEEEEVGACSSFFSLAQLNN* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0670 267 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 244 - -
Gso10g0670 267 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 137 199 IPR006458 -
Gso10g0670 267 MobiDBLite consensus disorder prediction 218 237 - -
Gso10g0670 267 Pfam Transcriptional repressor, ovate 142 198 IPR006458 -
Gso10g0670 267 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 244 IPR038933 GO:0045892
Gso10g0670 267 MobiDBLite consensus disorder prediction 207 237 - -
Gso10g0670 267 ProSiteProfiles OVATE domain profile. 138 197 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0670 Gso-Chr10 8618099 8619248 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso10g0670 Ovate 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0670 - - gmx:100806620 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1699 2 40389822 40391073 Gso10g0670 10 8618099 8619248 GST
Gso19g1655 19 45486440 45487749 Gso10g0670 10 8618099 8619248 PCT
Gso3g1684 3 42725126 42726493 Gso10g0670 10 8618099 8619248 PCT
Gso10g0670 10 8618099 8619248 Gso19g1655 19 45486440 45487749 PCT
Gso10g0670 10 8618099 8619248 Gso3g1684 3 42725126 42726493 PCT