Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0663 ATGGATAAAGATGCTAATTCAAAAATCCAACTCCCTCCTGGATTTAGATTCCACCTTTCTTATGAGGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAACTATAATCCATGGGAGCTCCCAACTTTGTTTGGGGAGGATGAGTGGTATTTCTTTACTCCTAGAGATAGGAAGTATCCCAATGGAATGAGGCCTAATAGAGCAACTACTTCTGGTTATTGGAAGCCTACCGGGACTGACAAACCCATTTTCACTTCCTGTGGGATGAAGAGCATTACTGTCAAGAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAATCGACTAG 387 0.4238 MDKDANSKIQLPPGFRFHLSYEELIVHYLRNKVTSSPLPASFIAEIDLYNYNPWELPTLFGEDEWYFFTPRDRKYPNGMRPNRATTSGYWKPTGTDKPIFTSCGMKSITVKKALVFYKGRPPKGSKID* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0663 128 Pfam No apical meristem (NAM) protein 12 126 IPR003441 GO:0003677|GO:0006355
Gso10g0663 128 Gene3D NAC domain 21 128 IPR036093 GO:0003677|GO:0006355
Gso10g0663 128 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 128 - -
Gso10g0663 128 SUPERFAMILY NAC domain 8 127 IPR036093 GO:0003677|GO:0006355
Gso10g0663 128 PANTHER NAC TRANSCRIPTION FACTOR 56 1 128 - -
Gso10g0663 128 ProSiteProfiles NAC domain profile. 11 128 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0663 Gso-Chr10 8307656 8308198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0663 10 128 NAC Transcription Factor Family AT1G61110 71.074 5.55e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso10g0663 NAM 3.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0663 - - gmx:100802373 272.707