Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g0638 | ATGTCACTATCATCCATTTTTCTAAACCCACCCCCACCCTCACCCTCTTTCCTCCACCTCCACTCCCCCAACCGCCACAACCACCACCACCCGCCAAAACCCCTCCAAATCCGCGCCAAAACCAACCCCACCCTCCAATTCCTCAAACCCTACCTCCTCTCCCAACACAAGCCCATCCTCTGCGGCTGGCTCTGCAGCGCCGTCTCCGTCTACTCCCTCTCCGCTCTCCTCTCCAAGCTCCCCAAACTCCCCATCCTTAGCGCCACCGCCGCCGACGCCGCCCCCATCGCCGCGCTCCTCCTCGTCGCGCGCCTCGCCGCCGGCTACGCGCAGCGCGCGCTCCTCTGGGAGGCCGCGCTCGGCGCCGTCTACGACCTCCGCCTTCACGTCTTCGACCGCGTCCTCCACCGCGAGCTCGCGTACTTCGAGGGCGTCTCCGCCGGTGACTTAGCGTACCGAATCACCGCCGAAGCCTCCGACCTCGCCGTTACCTTGTACACTCTTCTCAACACCATAGTACCTAGTACTCTGCAGTTGTCGGCAATGATGATGCAGATGTTAGTCATAAGTCCTACACTTTCTTTGATTTCAGCCATGATTGTTCCTTGCATGGTGCTAGTTGTTACCTTTCTTGGTCAAGAACTTCGCAAGATATCCAAAGAGGCACATGTTAGTATTGCTGCTCTCTCGGCCTATCTAAATGAGGTGCTTCCTGCAATTCTCTTTGTGAAAGCAAACAATGCACAGTCATGTGAGAATACCAGGTTTAAGAGATTGGCTCTGATGGACTATAATGCAAGGCTGAAGAAAAAAAAGATGAAAGCATTGATTCCTCAGGTTATACAAGCTATTTATTTTGGAGTCCTTTCCATACTTTGCGCTGGTTCGCTGATGATTTCAAGAGGTTCATTGGATCGCTATAGCTTGGTTTCATTCGTGACTTCATTGCTTTTCTTGATTCAGCCAATCCAGGATGTAGGGAAAGCTTATAATGAATGGAGGCAGGGAGAACCAGCTGCTGAACGCTTGCTTGCCATGACCAGGTTCAAAAATAAGGTGGTTGAGAAACCAGATGCTGCTGATTTGGACCGTGTTACAGGGGACCTGAAATTCTGTGATGTCTCCTTTGGGTATAACGATGACATGGCACTTGTTTTAAATGCATTAAATCTTCACATTAAATCTGGAGAGATAGTTGCTATTGTGGGTCCTTCTGGTGGAGGGAAAACAACACTTGTAAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGTTGTATACTGATTGATAACCATAACATCCAAAACATTCGGTTGGCAAGTTTGAGAAGACATGTTAGCGTTGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGACAACAAAAATTGACATGGACAGGGTGAAGCATGCAGCTCAAACTGCTCATGCAGACGAGTTTATTAAAAAACTTCCAGAAGGATACAAAACCAATATTGGACCAAGGGGATCAACTTTAAGTGGAGGCCAGAGGCAAAGGCTGGCTATTGCAAGGGCTTTCTATCAAAATTCTTCTATATTAATTCTGGATGAGGCAACTTCGTCCTTGGATAGTAAATCTGAGTTATTAGTGAGACAAGCTGTAGAGCGTTTGATGCAAAATCGCACAGTGCTTGTGATTTCCCATCGCTTGGAAACAGTTATGATGGCTAAACGAGTATTCCTTTTAGACAACGGGAAGCTAAAAGAGCTGCCTCAATCAACTTTGTTGGATGGTCATCACAAGGATTCATTGCTATCATCTGGGCTTGTTATTTGA | 1827 | 0.4756 | MSLSSIFLNPPPPSPSFLHLHSPNRHNHHHPPKPLQIRAKTNPTLQFLKPYLLSQHKPILCGWLCSAVSVYSLSALLSKLPKLPILSATAADAAPIAALLLVARLAAGYAQRALLWEAALGAVYDLRLHVFDRVLHRELAYFEGVSAGDLAYRITAEASDLAVTLYTLLNTIVPSTLQLSAMMMQMLVISPTLSLISAMIVPCMVLVVTFLGQELRKISKEAHVSIAALSAYLNEVLPAILFVKANNAQSCENTRFKRLALMDYNARLKKKKMKALIPQVIQAIYFGVLSILCAGSLMISRGSLDRYSLVSFVTSLLFLIQPIQDVGKAYNEWRQGEPAAERLLAMTRFKNKVVEKPDAADLDRVTGDLKFCDVSFGYNDDMALVLNALNLHIKSGEIVAIVGPSGGGKTTLVKLLLRLYDPISGCILIDNHNIQNIRLASLRRHVSVVSQDITLFSGTVAENIGYRDLTTKIDMDRVKHAAQTAHADEFIKKLPEGYKTNIGPRGSTLSGGQRQRLAIARAFYQNSSILILDEATSSLDSKSELLVRQAVERLMQNRTVLVISHRLETVMMAKRVFLLDNGKLKELPQSTLLDGHHKDSLLSSGLVI* | 609 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g0638 | 608 | ProSitePatterns | ABC transporters family signature. | 509 | 523 | IPR017871 | GO:0005524 | |
Gso10g0638 | 608 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 38 | 597 | IPR039421 | - | |
Gso10g0638 | 608 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 96 | 335 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gso10g0638 | 608 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 359 | 587 | IPR027417 | - | |
Gso10g0638 | 608 | CDD | ABC_6TM_exporters | 108 | 343 | - | - | |
Gso10g0638 | 608 | SUPERFAMILY | ABC transporter transmembrane region | 48 | 347 | IPR036640 | GO:0005524|GO:0016021 | |
Gso10g0638 | 608 | SMART | AAA_5 | 395 | 583 | IPR003593 | - | |
Gso10g0638 | 608 | Pfam | ABC transporter transmembrane region | 97 | 322 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gso10g0638 | 608 | Gene3D | ABC transporter type 1, transmembrane domain | 46 | 348 | IPR036640 | GO:0005524|GO:0016021 | |
Gso10g0638 | 608 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 369 | 606 | IPR003439 | GO:0005524 | |
Gso10g0638 | 608 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC | 38 | 597 | - | - | |
Gso10g0638 | 608 | Pfam | ABC transporter | 386 | 537 | IPR003439 | GO:0005524 | |
Gso10g0638 | 608 | Gene3D | - | 360 | 605 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g0638 | Gso-Chr10 | 7700536 | 7706341 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g0638 | 361 | 605 | Calmodulin-binding Proteins | AT2G36910 | 44.578 | 9.34e-54 | 196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g0638 | K02021 | - | gmx:100788075 | 1081.24 |