Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0619 ATGGTGGTGCCTGAGTCTCAGATGAATTCCCAAAACGAGGTAGAATCGCCGCTACAATTGGAGGAGCAGCAACAACAACAAAACAACAACAACAACAAGAACCACCCATTCTCATCACTAGGAAGACAATCTTCTTCAATATACTCGCTCACCCTCGACGAGTTCCAACACACTCTATGGGAGAATGGCAAGAATTTTGGGTCCATGAACATGGACGAGTTCCTCAGCAGCATATGGAGTGCAGAAGAGAATCAAGTTTTGAACAATTCCGTCTCTAACCACAACAACTTGTCTTTAGAAGCTTCAACAGAGAAAGGTGTGATAAGGAAGGAACCAAGCCTTCCTCGGCAAGGTTCTCTAACACTTCCTGCACCTTTGTGTAGGAAAACAGTGGACGAGGTTTGGTCTGAGATACACAAAGGACAACAATCTCAACAACAACAGCAACAGAACAATAACACTAACAACAATTGTGGCAGTAATAATAATAATAATGTACAGAATACCGAATCTGCCCCTCGCCAACCTACGTTTGGAGAGATGACTTTGGAGGATTTCTTGGTTAAAGCTGGGGTAGTTAGGGAACAGGGTGGAATGGCTGCAATGCCTGTTCAAGCTTCAGCACATCAGCATGTGCAACAATATGGCATGTATCCAAATAACAACCCTACAATGGGGGCTTCTTTTGTCGGTAGGCCGGTGATGGGGATGGCCGGTGGCGTCCGTGTTGGCAGTGGTGGTAGAAATGTGGTTGCACCGCCTTACCAGGCGGTGCCTCAGGGTGGTGTTGGTGTTGGTGTTGGTGGTGCAATTGCGGAGTCTTCAGGGTATGCTGGAAATGGAAAGAGGGATGTTGGGTATCCACCGGGGGCGCCGGGGGTTTGCTTTGGAGGGAGGGTGGTGAATGGTGGCGGTGGCTATGCGGCAGTGAGTAATATGGGAGTGGTGGCGCCGGTTAGCCCGGTTTCGCCGGAGGGGATAGGAACCGGCGAAAACTCTGGTGGGCAGTTTGGGATGGACATGAGTATGTTGAGAGGGAGAAAGAGGGTGTTGGATGGTCCTGTGGAGAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCTAGAGCAAGAAAACAGGCATACACTGTTGAACTGGAAGCAGAATTGAACCAATTGAAAGAAGAGAACGGCCAACTTAAACTAGCTCTGGCCGATCTTGAGAGGAGAAGAAAGCAACAGCATTTAGATCAGGAAGTGAATGGAAGAGTTCAAACCAACGCCCAGAAGGCCAAAAAGAAATTGAGATCATTGAGAAAGACCCTAAGTTGCCCTTTATGA 1344 0.4829 MVVPESQMNSQNEVESPLQLEEQQQQQNNNNNKNHPFSSLGRQSSSIYSLTLDEFQHTLWENGKNFGSMNMDEFLSSIWSAEENQVLNNSVSNHNNLSLEASTEKGVIRKEPSLPRQGSLTLPAPLCRKTVDEVWSEIHKGQQSQQQQQQNNNTNNNCGSNNNNNVQNTESAPRQPTFGEMTLEDFLVKAGVVREQGGMAAMPVQASAHQHVQQYGMYPNNNPTMGASFVGRPVMGMAGGVRVGSGGRNVVAPPYQAVPQGGVGVGVGGAIAESSGYAGNGKRDVGYPPGAPGVCFGGRVVNGGGGYAAVSNMGVVAPVSPVSPEGIGTGENSGGQFGMDMSMLRGRKRVLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENGQLKLALADLERRRKQQHLDQEVNGRVQTNAQKAKKKLRSLRKTLSCPL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0619 447 MobiDBLite consensus disorder prediction 426 447 - -
Gso10g0619 447 SMART brlzneu 357 421 IPR004827 GO:0003700|GO:0006355
Gso10g0619 447 Coils Coil 377 411 - -
Gso10g0619 447 CDD bZIP_plant_BZIP46 361 415 - -
Gso10g0619 447 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 364 379 IPR004827 GO:0003700|GO:0006355
Gso10g0619 447 MobiDBLite consensus disorder prediction 137 176 - -
Gso10g0619 447 Coils Coil 422 442 - -
Gso10g0619 447 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 4 446 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Gso10g0619 447 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 359 411 IPR004827 GO:0003700|GO:0006355
Gso10g0619 447 Gene3D - 359 410 - -
Gso10g0619 447 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 446 IPR043452 GO:0003700|GO:0045893
Gso10g0619 447 SUPERFAMILY Leucine zipper domain 361 410 IPR046347 GO:0003700|GO:0006355
Gso10g0619 447 MobiDBLite consensus disorder prediction 1 41 - -
Gso10g0619 447 Pfam bZIP transcription factor 361 413 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0619 Gso-Chr10 7393472 7399622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0619 1 415 bZIP Transcription Factor Family AT2G36270 50.783 1.57e-109 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso10g0619 bZIP_1 9.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0619 K14432 - gmx:106794959 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1612 19 45098500 45103797 Gso10g0619 10 7393472 7399622 PCT