Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0599 ATGGCTTCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCCAAGCCCTGCAGCCCTCACCACCAATGGCAGCATGACATCAACGCCTCCCTCATCTCCACTAGCTGCCACAGAAGCCCTTACTCTTCAGGAGGTGGTGGTTGTGAAGAGAGAAGTCCAGAGCCAAAGCCAAGGTGGAACCCTAAACCTGAGCAAATCAGAATACTGGAGGCTATATTCAACTCTGGAATGGTGAATCCTCCGAGGGATGAGATAAGGAAGATAAGGGCACAGTTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTCTTCTATTGGTTCCAGAATCGCAAGTCAAGGAGCAAACACAAACTTCGCCATCTCCAAAACTCATCATCAAAGAACATGAACCACCATCACCACATGAATGTTGATCAACAAAATCATACAATTCCCACTAATTCTTCTCTCCCTCAAACCACTACTACTGCACCCTCTTCCTCGTCATCTTCATCGTCTGAGAAATCTTCCCCAAAAGAACTTATAATACCTACCACCAAGGTGTTCTCCATTGGATTCTCCGATGCGGTGCCTAATTCTCCAACAGCTTCTGTAAACCAGACCCGGATTAATGACATCATGCTTCCACCACCACCACCAGTTGAGGCTTTCTTCTTCCCAGTGCAACAACAACATGATGTGCATCATGGAGTAACATCATCATCACAAGGGTTTTGCTTCTCTGAGCTGTCCAATGTTGTTCATGCTCAACAGAACAACGTTGGCCCTTGCACTAGCCTCTTGCTTAGTGAGATCGTAGGTCATGGTGCTGCTTCTGCTGGTGCCTCAAAGAAAGACAAGTCTCAGATGAAAATAATGCACCAGCCCTCACTGCTTAATTTCTGTGTCACTACTCCAACAACAGCAACAACATCAACTCCTACTACTACCACCACTGTTGTTGTACCTCCCATCACTACTACCTCTACTACTGTTTCATCCCCCCTCATGCCTCAGCTTCAAGGTATTGGAGATCCAGGTGGTGCGGCGAGATCAACGGTGTTCATTAACGATGTGGCATTCGAGGTAGCTGTGGGACCCTTCAACGTGCGTGAAGCTTTTGGAGATGATGTTGTGCTCATCCATGCCAGCAGTGGTCAACCTGTGCTAACAAACCAATGGGGTCTCACTCTTCATTCACTCCAGCATGGCGCATGTTATTATTTGATATAG 1212 0.4703 MASSNRHWPSMFKSKPCSPHHQWQHDINASLISTSCHRSPYSSGGGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSSSKNMNHHHHMNVDQQNHTIPTNSSLPQTTTTAPSSSSSSSSEKSSPKELIIPTTKVFSIGFSDAVPNSPTASVNQTRINDIMLPPPPPVEAFFFPVQQQHDVHHGVTSSSQGFCFSELSNVVHAQQNNVGPCTSLLLSEIVGHGAASAGASKKDKSQMKIMHQPSLLNFCVTTPTTATTSTPTTTTTVVVPPITTTSTTVSSPLMPQLQGIGDPGGAARSTVFINDVAFEVAVGPFNVREAFGDDVVLIHASSGQPVLTNQWGLTLHSLQHGACYYLI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0599 403 Gene3D - 56 122 - -
Gso10g0599 403 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 403 - -
Gso10g0599 403 SMART HOX_1 54 121 IPR001356 GO:0003677
Gso10g0599 403 CDD homeodomain 55 117 IPR001356 GO:0003677
Gso10g0599 403 Pfam Homeodomain 56 116 IPR001356 GO:0003677
Gso10g0599 403 MobiDBLite consensus disorder prediction 139 172 - -
Gso10g0599 403 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 403 IPR044557 GO:0003700|GO:0050793
Gso10g0599 403 MobiDBLite consensus disorder prediction 38 61 - -
Gso10g0599 403 ProSiteProfiles 'Homeobox' domain profile. 52 117 IPR001356 GO:0003677
Gso10g0599 403 SUPERFAMILY Homeodomain-like 52 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0599 Gso-Chr10 7009670 7013023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0599 1 125 Wox Gene Family AT2G33880 82.677 6.04e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso10g0599 Homeodomain 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0599 - - gmx:100804839 696.427