Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0585 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTCGAAGCAAGGGAAGACCTAAATACAGAGAAAGATACGGGGATATATCAGTCCAATTCTGGATATAGCCTGGATGAGAAATTTCAGAAGCATCCTGTGCAGAAACTGGGATATAAGGGTAATCTAGATGATGATATTAATAAGCTGTTTGAGTCAATTACTCTTAAATCTTCCTCAAGGGATTTGGGCTTTATACATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAACCAATTGCAGTGGGTGCTTCTCGGTCCCCACGAGTTGGACCTTCTGAGCCTGTGACTTTGAAGCAGGCACTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTTCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCACGAATATCTGAGGTTGGGAAGATACATACATTGTACAATTCAGTTGTAGTTGAAGGTAGACGATCTGAGCCTTCTAATGTTGAGAGTAAAGGTAGTACAAGTGAAATATCTCTAGTGCCAGAAGAGAGCAACTCACTTTCTTTGGATAATGCTTACCAGTCTCGTTCAACTGTTAAAAGCACTTCGCTGAGCCCAAATGTTCAATCTTCCAAAATTGCTGTTGCAATTGCAATTACACAAAATGATACTGGGGCTTCATTGATGCCAAGTGACCTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACCGTCATCAGAGCCTGCTCAAATAGAGAAACAAACATCTGAATCTTCTTCATCTAGTTGTAACACCAATGGAAGTAAATTAGAGTTGCCCGAAAATGCTTCTTCCCCTAAAAAGATAGGAAATAAAGCCTCTGCATCAAAGAATGGGCGGAAAGGTAGGTTACAAACAGTCTCTTCCTCATCTACTTCGGTAAATGGCAATAGAGTGTGCAAACTGTCACGCAATGCCCCTCGTACAGTCAAATCAATTATCAAGAACAAAAATTTTGGAAAGAAAAAAGTAAAGCAGGATTCAGTTTCTGCTTTATTTGATCCTACATGCAGTGAAGTAAATGACAAGTCAGTTTCTGGTACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATTGAAAATAACAAAGGTATTACATCATTGGACTCTATCAGTCCTGGAGAGGGAATAAACTCTGTTAATAACTCTGGCGCTGCATCAGCTGGCTGTAATAGCAGCAGAGAAGTTACAAAAGTGAAAAAGAACACCGTATTGAAAGAGCAACTTGAATTTTCTCAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGAAAGCCATACGCCATGCTCAAATTCAGAATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAGTTGTTTGTTTGCTATTAAGGTGATGGACAATGAGTTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAACGAGAAATATTGAGGATGCTGGATCATCCTTTTCTTCCAACACTGTATGCTCAGTTTACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCGCTAAGGTGTGATGTTAGCCCAACACTTCTGAAGTCATCTTATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCGAGTTGCATTGAGCCATTCTGTATTGAACCAGCCTGTCAAGTTCCGTGCTTCAGCCCAAGACTCCTACCTCCTGCCGCAAAAGCAAGGAAATTAAAAAATGACCTTGGTGCTCAGCTCAGATCATTGCCACAGCTCGTGGCTGAGCCCACAGATGCAAGATCAAATTCATTTGTCGGTACTCATGAATACTTGGCGCCTGAGATCATCAAAGGAGAAGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACACCCCATTTGTTAGTATCCAAGCGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATAAAACAGCACCCCTTCTTCGAAGGCCTTAATTGGGCGTTAATACGTTGCGCTATCCCACCAGAACTGCCAGACTTGTGTGAATTTGGAGTTTCAGAGATGACCCCACAGTCCCAGGGAAAGGGTGTTAAGTATGTAGAGTGCAATGCAGCAGGAGAGCTAGTTGAATTTGAGTTGTTTTGA 2592 0.4198 MGSFSGTCEIVEAREDLNTEKDTGIYQSNSGYSLDEKFQKHPVQKLGYKGNLDDDINKLFESITLKSSSRDLGFIHGTSPKMKSALKKPIAVGASRSPRVGPSEPVTLKQALRDLCISKASEMASMKRLSKSTASPRISEVGKIHTLYNSVVVEGRRSEPSNVESKGSTSEISLVPEESNSLSLDNAYQSRSTVKSTSLSPNVQSSKIAVAIAITQNDTGASLMPSDLASSSSKVGVLSPSSEPAQIEKQTSESSSSSCNTNGSKLELPENASSPKKIGNKASASKNGRKGRLQTVSSSSTSVNGNRVCKLSRNAPRTVKSIIKNKNFGKKKVKQDSVSALFDPTCSEVNDKSVSGTTQLVCERCWCAIENNKGITSLDSISPGEGINSVNNSGAASAGCNSSREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDVRWKAIRHAQIQNGVLGLRHFNLLKKLGCGDIGTVYLAELIGKSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSYVDPAKISGPCAQSSCIEPFCIEPACQVPCFSPRLLPPAAKARKLKNDLGAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDTPFVSIQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFGVSEMTPQSQGKGVKYVECNAAGELVEFELF* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0585 863 Pfam Protein kinase domain 480 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0585 863 Pfam Protein kinase domain 707 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0585 863 MobiDBLite consensus disorder prediction 225 306 - -
Gso10g0585 863 MobiDBLite consensus disorder prediction 156 186 - -
Gso10g0585 863 MobiDBLite consensus disorder prediction 420 452 - -
Gso10g0585 863 SMART serkin_6 479 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0585 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Gso10g0585 863 MobiDBLite consensus disorder prediction 225 269 - -
Gso10g0585 863 MobiDBLite consensus disorder prediction 420 454 - -
Gso10g0585 863 SUPERFAMILY Protein kinase-like (PK-like) 454 827 IPR011009 -
Gso10g0585 863 MobiDBLite consensus disorder prediction 276 306 - -
Gso10g0585 863 ProSiteProfiles Protein kinase domain profile. 479 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0585 863 CDD STKc_phototropin_like 477 829 - -
Gso10g0585 863 Gene3D Phosphorylase Kinase; domain 1 477 558 - -
Gso10g0585 863 PANTHER FLIPPASE KINASE 1-RELATED 1 863 - -
Gso10g0585 863 MobiDBLite consensus disorder prediction 162 186 - -
Gso10g0585 863 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 863 - -
Gso10g0585 863 Gene3D Transferase(Phosphotransferase) domain 1 704 827 - -
Gso10g0585 863 Gene3D Transferase(Phosphotransferase) domain 1 559 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0585 Gso-Chr10 6779134 6784403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0585 1 863 AGC Kinase Gene Family AT2G36350 51.867 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso10g0585 Pkinase 7.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0585 - K08286 gmx:100815359 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1451 19 43393819 43395111 Gso10g0585 10 6779134 6784403 PCT
Gso3g1463 3 40613601 40615091 Gso10g0585 10 6779134 6784403 PCT
Gso19g1600 19 44981730 44985286 Gso10g0585 10 6779134 6784403 PCT
Gso3g1622 3 42209658 42213236 Gso10g0585 10 6779134 6784403 PCT
Gso10g0585 10 6779134 6784403 Gso19g1600 19 44981730 44985286 PCT
Gso10g0585 10 6779134 6784403 Gso3g1622 3 42209658 42213236 PCT