Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0577 ATGAAGACGATAATAGAACGCTGTGTCTCTGCAAGTGCCACACGTATCTGTGCTCCTCTGTCTTACACAAAGTATCCATGTAATAACATTAACATGTTTGCAACTTGTTCAGCATCATCATCCTCAACAACAAGAAGACCTTTATCTCTTTCTCTCATCTCCACCACTTTCTCTGCATTCATTTTCTCACTTCCTCCCCCAGCTCCTTCCTCTTCTTCTCCCTTTCCTTCTTCAAAGTTCCCCGTATCAAAGTTCTTTGAGATCCCCAATTCTGGTGGAGTTAAGGCTTTGGAACTTCTTGATGGTTCAGGTGAAGTTCCCTCAGATGGGGACCAGGTTGCAATTCACTACTATGGCAGGCTGGCAGCTAAACAAGGATGGCGCTTTGACTCAACCTATGACCACAAAGATAACAATGGTGATCCCAATCCGTTTGTCTTTGTCCTTGGCTCTGGCAAGGTTATTGCTGGAATTGATGTGGCAGTGAGATCGATGAAAGTAGGAGGTATTCGTAGAGTTATCATACCTCCATCACTTGGGTATCAAAACACATCACAAGAGCCCATCCCACCAAATAAGGTTGCTATGAGCCTATGA 597 0.4422 MKTIIERCVSASATRICAPLSYTKYPCNNINMFATCSASSSSTTRRPLSLSLISTTFSAFIFSLPPPAPSSSSPFPSSKFPVSKFFEIPNSGGVKALELLDGSGEVPSDGDQVAIHYYGRLAAKQGWRFDSTYDHKDNNGDPNPFVFVLGSGKVIAGIDVAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNKVAMSL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0577 198 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 194 IPR001179 GO:0003755
Gso10g0577 198 Gene3D - 81 196 IPR046357 GO:0003755
Gso10g0577 198 SUPERFAMILY FKBP-like 88 195 - -
Gso10g0577 198 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 110 198 IPR001179 GO:0003755
Gso10g0577 198 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 28 192 IPR044197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0577 Gso-Chr10 6598828 6602942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0577 64 192 Calmodulin-binding Proteins AT5G48570 36.154 5.46e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0577 - - gmx:100808927 322.013