Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0564 ATGAGATCTTTTTCTTTAGAGCAATGGACAACAGCAATCATTCACACAACCATTCCCTACCTTTATATTGTTTCAATTTGTTTGCACTTCCCGCCTCATAGACAACAAAGGAAAAATATGAACTTGGCTCCTCTTCATCATCTTCATCACATGATGATGAAGCATTACCATGTCTTGTTCATGTTTTTATTTTTCTTACCGATTTTCACGTTAAGTCTCCACCACAATGACACTCATGCACTTACACTTTTCCGTCGCCAAAGTGACCTACATGGCTACCTTCTTTCAAATTGGACAGGCGGCGATGCTTGTATCGCCGCCTGGCGCGGCGTTCTTTGTTCTCCGAATGGCCGTGTCACCGCCCTCTCCCTCCCTTCCCTCAACCTCCGTGGAGCCCTAGACCCTCTCACTCCCCTCACCCACCTCCGCCTCCTCAACCTCCACGACAACCGCTTAAACGACACCATTTCGCTGTTATTCTCCAATTGCACCAACCTCCAACTCCTCTACCTCAGCAGCAACGACTTCTCCGGTGAGATCCCGCCGGAGATATCCTCCCTAAAATCCCTCCTCCGCCTTGACCTCTCCGACAACAACCTTCGCGGCAAGGTTGATGTGATATCAAACTTAACACAACTCATAACACTAAAACTCCAGAACAACCTTCTCTCTGGCGAAATCCCCGACCTTTCATCCTCCATGAAGAACCTCAAAGAACTCAACATGACAAACAACGAGTTCTACGGTCACTTACCATCCCCCATGCTGAAGAAATTCAGTTCCACGACGTTCTCTGGTAACGAGGGGTTGTGCGGTGCAACACCATTACCAGGTTGCTCTTTCACCACAACCCCTCCTAAGGATAATGGTAATAATAACAACAATGAAAAGGAACCGTCGTCTCAGACAACGGTTCCTTCAAACCCTAGCTCCTTCCCTGAGACAAGTGTGATAGCTCGTCCAGGGAAAGAGCAACGACACAGGGGTTTGAGTCCTGGCGCCATCGTGGCCATGGTGGTCGCGAATTGCGTGGCACTGCTCGTGGTGACGTCGTTTGTGGTGGCGCATTGCTGTGCTAGAGGGAGGGGTTCGAGCTTGGTGGGGAGTGGAGAGAGCTATGGGAAGAGGAAGAGTGGGAGCAGCTACAATGGGAGTGAGAAGAAGGTGTATGGTGGTGGTGAGAGTGATGGAACCAATGGAACTAATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATTTGCTTCGAGCTTCGGCGGAGATGCTTGGGAAGGGGAGTTTGGGGACAGTTTATAGGGCGGTGCTTAATGATGGGTGCATTGTGGCAGTGAAGAGGCTCAAGGATGCGAACCCTTGTGCAAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAGCATTCTAATGTTGTGAGACTCAAGGCTTATTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGATGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGAAGAATTCCATTGGATTGGACTACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGTCTAGCCAAGATTCATGCAGAGTACAGTGCAGCCAAAGTGCCTCACGGGAATGTGAAATCCTCCAACGTTCTTCTAGACAAGAACGGTGTTGCATGCATCTCAGACTTCGGGTTATCACTCCTCCTAAACCCGGTTCACGCCATTACACGGTTGGGAGGGTATAGAGCCCCGGAACAGGAACAGAACAAGAGGCTATCTCAGCAGGCTGACGTATACAGTTTTGGAGTATTGTTGTTGGAGGTTCTCACAGGAAGAGCTCCTTCATTGCAATACCCTTCACCGGCTCGTCCCCGAATGGAGGAAGAGCCGGAGCAGGCTACGGTGGACCTTCCAAAATGGGTTCGGTCGGTGGTGAGGGAAGAGTGGACTGCAGAGGTGTTTGATCAGGAGCTGTTGCGCTACAAGAACATTGAGGAAGAACTTGTGTCCATGCTGCATGTAGGGTTGGCTTGTGTGGCAGCGCAACCGGAGAAGAGGCCTACCATGGAGGAAGTTGTGAAGATGATTGAGGAGATCAGGGTGGAGCAATCACCTCTTGGGGAGGACTATGACGAATCGCGTCATTCACTTTCGCCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 2208 0.4968 MRSFSLEQWTTAIIHTTIPYLYIVSICLHFPPHRQQRKNMNLAPLHHLHHMMMKHYHVLFMFLFFLPIFTLSLHHNDTHALTLFRRQSDLHGYLLSNWTGGDACIAAWRGVLCSPNGRVTALSLPSLNLRGALDPLTPLTHLRLLNLHDNRLNDTISLLFSNCTNLQLLYLSSNDFSGEIPPEISSLKSLLRLDLSDNNLRGKVDVISNLTQLITLKLQNNLLSGEIPDLSSSMKNLKELNMTNNEFYGHLPSPMLKKFSSTTFSGNEGLCGATPLPGCSFTTTPPKDNGNNNNNEKEPSSQTTVPSNPSSFPETSVIARPGKEQRHRGLSPGAIVAMVVANCVALLVVTSFVVAHCCARGRGSSLVGSGESYGKRKSGSSYNGSEKKVYGGGESDGTNGTNRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLNDGCIVAVKRLKDANPCARHEFEQYMDVIGKLKHSNVVRLKAYYYAKEEKLLVYDYLSNGCLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAITRLGGYRAPEQEQNKRLSQQADVYSFGVLLLEVLTGRAPSLQYPSPARPRMEEEPEQATVDLPKWVRSVVREEWTAEVFDQELLRYKNIEEELVSMLHVGLACVAAQPEKRPTMEEVVKMIEEIRVEQSPLGEDYDESRHSLSPSIPTTEDGLA* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0564 735 Pfam Leucine rich repeat N-terminal domain 75 114 IPR013210 -
Gso10g0564 735 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 57 725 - -
Gso10g0564 735 ProSiteProfiles Protein kinase domain profile. 422 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0564 735 MobiDBLite consensus disorder prediction 365 398 - -
Gso10g0564 735 PANTHER LRR RECEPTOR-LIKE KINASE 57 725 - -
Gso10g0564 735 Gene3D Phosphorylase Kinase; domain 1 395 497 - -
Gso10g0564 735 MobiDBLite consensus disorder prediction 709 735 - -
Gso10g0564 735 MobiDBLite consensus disorder prediction 281 327 - -
Gso10g0564 735 Gene3D Transferase(Phosphotransferase) domain 1 498 722 - -
Gso10g0564 735 SUPERFAMILY Protein kinase-like (PK-like) 426 703 IPR011009 -
Gso10g0564 735 Gene3D Ribonuclease Inhibitor 69 138 IPR032675 -
Gso10g0564 735 Gene3D Ribonuclease Inhibitor 139 285 IPR032675 -
Gso10g0564 735 SUPERFAMILY L domain-like 74 264 - -
Gso10g0564 735 Pfam Protein kinase domain 426 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0564 735 MobiDBLite consensus disorder prediction 281 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0564 Gso-Chr10 6360361 6363869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0564 70 731 Receptor kinase-like Gene Family AT2G36570 64.602 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso10g0564 Pkinase 3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0564 - - gmx:100804135 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1576 19 44686648 44689397 Gso10g0564 10 6360361 6363869 PCT
Gso3g1595 3 41872165 41874666 Gso10g0564 10 6360361 6363869 PCT
Gso10g0564 10 6360361 6363869 Gso19g1576 19 44686648 44689397 PCT
Gso10g0564 10 6360361 6363869 Gso3g1595 3 41872165 41874666 PCT