Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0563 ATGGCCTCTTGCGACGACGACGATGACTTCTCTCTCCTCCGCGATGACACCCACCACCACCTCCACCAGCCCTACGCGCCGCACCACCATCACTTCTCCCCCTCCGCCGTCTCCGTCGCCTCCGCCTCCTCCGTGCCGCCTAAACCCGCCGCCGCCGCAGACGACGACGCCGAGGACTTCTCCAACCCCTTCGACGAAGACGACGACGGCGAGAAGCGCAAGGAGCGCGACGAGATCGGCGAGGGAGCCGCCTCGTACGGATTCAACAACAAGAGATCTAAGACGACGGCTCCGTCGAACGGCGTCGGCGCCGTATCCGGCGGCGCCGAGTACCGCAAGGACCGGGAGGAGTGGAGCGACACGGCGATTGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACGCAGTTGAACCGGGGGAACCTGAGGGGAAGGGATTGGGAGGAGGTTGCGGCGGTGGTGAGCGAACGGTGCGAGAATCAATCAAAGAGCGTTGAACAGTGTAAAAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACACAGAATGAGCAGTGGCTGCATTTCCACCAGCCACTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGAAATTCTCTCCCGGCGAAGTTCTCCGACGAGGATAAAGCGGTCATTTCAGCCGGAACTTCGCCCCGGCAATCGAAAAGATATGGAGTGGCAACACCCAGCACTGGAGGTCCAGCAAATAGCATGAAGTCCAAAGCATTGTCAAACAGTAGATGGCGGAGGGTAGTCCTCAAAATTAGTGGGGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCAATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGAGGCTTGGGTAAATGTGACAGGTTTAGAAAGATGTACTGCGTACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGGGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCACTCCTCTTTTCTCAACCGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCAGTTCTAAAGGGTACTAATGTAGATGGTGTATACGACTGCAACTCACGAGACAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTAGGTTCAAGAGGTGTCACCTCTATGGATATGTCAGCGCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1494 0.5228 MASCDDDDDFSLLRDDTHHHLHQPYAPHHHHFSPSAVSVASASSVPPKPAAAADDDAEDFSNPFDEDDDGEKRKERDEIGEGAASYGFNNKRSKTTAPSNGVGAVSGGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVISAGTSPRQSKRYGVATPSTGGPANSMKSKALSNSRWRRVVLKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGEAWVNVTGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGTPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0563 497 MobiDBLite consensus disorder prediction 66 81 - -
Gso10g0563 497 PANTHER URIDYLATE KINASE 65 497 - -
Gso10g0563 497 Gene3D - 118 181 - -
Gso10g0563 497 Coils Coil 158 185 - -
Gso10g0563 497 SUPERFAMILY Carbamate kinase-like 257 490 IPR036393 -
Gso10g0563 497 MobiDBLite consensus disorder prediction 88 102 - -
Gso10g0563 497 Pfam Myb/SANT-like DNA-binding domain 115 205 IPR044822 -
Gso10g0563 497 MobiDBLite consensus disorder prediction 21 108 - -
Gso10g0563 497 CDD AAK_UMPK-PyrH-Ec 259 491 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gso10g0563 497 MobiDBLite consensus disorder prediction 230 250 - -
Gso10g0563 497 Pfam Amino acid kinase family 260 470 IPR001048 -
Gso10g0563 497 Hamap Uridylate kinase [pyrH]. 256 491 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gso10g0563 497 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 65 497 IPR011817 GO:0006221|GO:0009041
Gso10g0563 497 Gene3D - 248 496 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0563 Gso-Chr10 6354790 6359932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0563 99 209 Trihelix Transcription Factor Family AT3G14180 36.842 1.42e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso10g0563 AA_kinase 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0563 - - gmx:100805176 892.493