Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0561 ATGGAACCCATTGGACTAGGTTGTGGAATGTTCTCTGGGTTGGTAGGAGTGGAAAGCCCTTTACAACAGCAACAACAGGAACAAAACCCTCACCATTTGCAACACCATCCCCAAATGGTTCCCTATGCCACACACCATGACACTGAAAACCCTCATCATCCACACCTTCACCATTCAATCAAACAAGGGTACCCTCCTTTTTTATCCAAGACTAAACAACAACAGCAACAGCAACAGCAACAAAGCTCTTTCAGTGATGATGATGAGCCAGGGTCTGCTGATGATGACCCCAAGAAGAAGGTCTCACCATGGCAGAGAATGAAGTGGACTGATACCATGGTGAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAAGCTGGCTCTGAAGGGACTGATAAGAAGAAAGCCTCTGGTTTGATGCAGAAGAAAGGGAAGTGGAAATCGGTTTCAAGGGCTATGATGGAGAAGGGGTTCTATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAGTGACTTGAACAAGAGGTATAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAACTTGTTGGATTCAATGGACTTGTCTCCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAGGCACTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGAAATGGGAATAACAATGCTCCACAGCAAGGAGAGTCTGGTGGTGAAGTGTCTCAGCCTCAGTCTCAGTCTCAGGCTCAACCTCATCATCAACAGCAGCAGCAACCGCAGCAACAACGATGTTTTCATTCATCAGAGGTGGCAAATTTGGGGGGTTCAGGTGTGGAGGGTTTGAGGGTGTTGAAAGTGGGAAATGGGGAAGAGGGTGATGATGATGAGGATGAGGATGATGATGAATCCGAGGATGATTCGGATGAGGATGAAGATGATTTGGGAGAAGGTGGTTCGAGGGGTCATGTGGGGCATGGACATGAAGACATTGAGGATGAGAATGATGGAAGGACAATGAGGAAGAGGGCAAGGAAAGTAGGAGGAGGGGTTTCCAATTCTCTGTCACCACAGACGATGCAGCAACTGAGTGCTGAAGTGACTGGCATGTTCCAAGACGTAGGTAAGAGTGCTTGGGACAAGAAACAATGGATGAGGAATAGGATGAAGCAGTTGGAGGAGCAGCGAATAAGCTACCATACACAAGCATTTGAGTTGGAGAAACAAAGGCTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAACTTGAAAATGAAAGAAGGAAGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAGCTTGAATTGATGGGTCTTCAACCCCAACAACAGCAGCATCAGCAACAACAACAACATTCTTCCACCTAG 1446 0.4633 MEPIGLGCGMFSGLVGVESPLQQQQQEQNPHHLQHHPQMVPYATHHDTENPHHPHLHHSIKQGYPPFLSKTKQQQQQQQQQSSFSDDDEPGSADDDPKKKVSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDKKKASGLMQKKGKWKSVSRAMMEKGFYVSPQQCEDKFSDLNKRYKRVNDILGKGTACRVVENQNLLDSMDLSPKMKEEVKKLLNSRHLFFREMCAYHNSCGNGNNNAPQQGESGGEVSQPQSQSQAQPHHQQQQQPQQQRCFHSSEVANLGGSGVEGLRVLKVGNGEEGDDDEDEDDDESEDDSDEDEDDLGEGGSRGHVGHGHEDIEDENDGRTMRKRARKVGGGVSNSLSPQTMQQLSAEVTGMFQDVGKSAWDKKQWMRNRMKQLEEQRISYHTQAFELEKQRLKWARFSSKKEREMERAKLENERRKLENERMVLLIRQKELELMGLQPQQQQHQQQQQHSST* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0561 481 MobiDBLite consensus disorder prediction 66 87 - -
Gso10g0561 481 Pfam Myb/SANT-like DNA-binding domain 106 229 IPR044822 -
Gso10g0561 481 Coils Coil 399 419 - -
Gso10g0561 481 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 481 - -
Gso10g0561 481 Coils Coil 427 456 - -
Gso10g0561 481 PANTHER F16F4.11 PROTEIN-RELATED 1 481 - -
Gso10g0561 481 MobiDBLite consensus disorder prediction 326 353 - -
Gso10g0561 481 MobiDBLite consensus disorder prediction 42 104 - -
Gso10g0561 481 Gene3D - 109 180 - -
Gso10g0561 481 MobiDBLite consensus disorder prediction 301 325 - -
Gso10g0561 481 MobiDBLite consensus disorder prediction 238 276 - -
Gso10g0561 481 MobiDBLite consensus disorder prediction 298 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0561 Gso-Chr10 6339415 6341426 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso10g0561 Myb_DNA-bind_4 3.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0561 - - gmx:100798278 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1593 3 41857631 41859631 Gso10g0561 10 6339415 6341426 PCT
Gso10g0561 10 6339415 6341426 Gso3g1593 3 41857631 41859631 PCT