Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0558 ATGGGGGACAAGCACCAGCAGCACCACCAAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAAGATTACCGCCGCGGCGGCTACCACGCCGTCCGAATCGGCGACGCCTTCAGCGCCGGTCGCTACGTCGTTCAGAGTAAACTCGGCTGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACACCAAACATTCTAGATACGTGGCTTTGAAAGTTCAGAAGAGTGCTCAGCACTACACTGAGGCAGCTATGGATGAGATAACAATTTTGCAGCAGATTGCAGAGGGAGATCCTGATGATAAGAAGTGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGTCCCAATGGACAGCATGTTTGCATGGTGTTTGAGTACCTTGGGGACAATCTTTTGACTCTTATTAAGTACTCGGATTATCGGGGGTTGCCTATTGCCATGGTTAAGGAGATTTGCTTTCATATTCTGGCTGGATTGGATTACTTGCACCAGCAGCTTTCTATCATACATACTGACTTGAAGCCCGAAAACATCTTGCTCTTGTCGACAATTGATCCGTCTAAGGATCCTAAGAAGTCTGGGGCGCCACTTATTCTTCCTAATAGTAAAGATAAGATGGCGATGGAGTCAGCAGGGATGAAAGATATGAAAATGTTGAATGGGGATTTGGTTAAGAATCATAAGAAAAAGATTAAGAGAAAAGCTAAGCAAGCAGCCCATGGATGTGTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATGCTGAAACCTCTGGGGCTGTGGAGTCATCTCCCAATGCGAGTTCTGCGAGAGAACAGACTTCTAGTTCTGCAGGAACTAGTCAGTTATCGGATGCTGATGGAACAAAGTTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGCTCTATGAGACAGAAGCTGCTGGCATCGGTTGATCTCAAGTGCAAGTTGGTGGACTTTGGTAATGCCTGCTGGACATATAAACAGTTTACAAATGATATCCAGACAAGACAGTATCGGTGCCCGGAGGTGATCCTTGGGTCAAAATATTCTACATCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTATTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGTGGCCGTTATTCCCGTGATTTCTTTAATAGATATGGTGACTTAAGGCACATTCGACGGTTGCGATTCTGGCCCTTGAATAAAGTCCTCTTGGAGAAGTATGACTTGAGTGAGAAAGATGCAAATGATATGACAGACTTTTTGGTTCCTATCCTTGACTTTGTTCCTGAGAAGCGGCCAACAGCTGGTCAGTGCCTTCTCCATCCATGGATGAATGCTGGTCCACGCCTTTTGGAGCCATCTGTGCCTTCTAATCACAACCCTGCTGCTGAAACTTCCGTTTCGGATCAGAAGAGAAAGGACAAAGATGAGAGGGAGGCCATGGAGACAGGAATGGGGAATATTGTTATCAATTCAGATTTTAAACCACTAATGCATTCTCCATCAAAGAAAGTCTTCCAAGGCAGAAGCCAGAAGTAG 1644 0.4611 MGDKHQQHHQDDSSDFTSEDEGTEDYRRGGYHAVRIGDAFSAGRYVVQSKLGWGHFSTVWLAWDTKHSRYVALKVQKSAQHYTEAAMDEITILQQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILAGLDYLHQQLSIIHTDLKPENILLLSTIDPSKDPKKSGAPLILPNSKDKMAMESAGMKDMKMLNGDLVKNHKKKIKRKAKQAAHGCVEKEASEGVEGNAETSGAVESSPNASSAREQTSSSAGTSQLSDADGTKLKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLLEKYDLSEKDANDMTDFLVPILDFVPEKRPTAGQCLLHPWMNAGPRLLEPSVPSNHNPAAETSVSDQKRKDKDEREAMETGMGNIVINSDFKPLMHSPSKKVFQGRSQK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0558 547 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 541 - -
Gso10g0558 547 SUPERFAMILY Protein kinase-like (PK-like) 41 493 IPR011009 -
Gso10g0558 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gso10g0558 547 SMART serkin_6 45 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0558 547 MobiDBLite consensus disorder prediction 501 517 - -
Gso10g0558 547 Pfam Protein kinase domain 45 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0558 547 Pfam Protein kinase domain 312 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0558 547 PANTHER SERINE KINASE-LIKE PROTEIN 12 541 - -
Gso10g0558 547 MobiDBLite consensus disorder prediction 238 307 - -
Gso10g0558 547 Gene3D Transferase(Phosphotransferase) domain 1 128 480 - -
Gso10g0558 547 MobiDBLite consensus disorder prediction 241 255 - -
Gso10g0558 547 MobiDBLite consensus disorder prediction 485 547 - -
Gso10g0558 547 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Gso10g0558 547 ProSiteProfiles Protein kinase domain profile. 45 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g0558 547 Gene3D Phosphorylase Kinase; domain 1 21 127 - -
Gso10g0558 547 CDD STKc_SRPK 34 479 - -
Gso10g0558 547 MobiDBLite consensus disorder prediction 261 293 - -
Gso10g0558 547 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0558 Gso-Chr10 6281312 6288016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0558 1 526 EF-hand Containing Proteins AT5G22840 67.742 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gso10g0558 Pkinase 9.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0558 K08832 - gmx:100803070 1103.97