Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso10g0551 | ATGAAACTCTCTGTTTTCCACCATCAGCACCATCCTATGATTCTCAATTGCCCCCTTACCTTGACAAGAACACACAAAAGACTTAACAACAAAGGTTCATATAGGTGGTTACCATGCCACTGCTCACATTCTTCCACAAATAAAATTGCTGCTGAACCAGTTACGGTGTCTTTAAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGTTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGGGGAGCCAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGTTTGAAGTACTATGATTTGAAGGTTGGGAATGGAGCTGAGGCTAAAAAGGGATCCCGTGTTGCAATTCACTATGTTGCCAAATGGAAGAGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGGGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAAGGCATGCGGGTAGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAAGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGTTGGACATTGAATTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCAGTAAAGATAGTTGAAGGTTAA | 702 | 0.4345 | MKLSVFHHQHHPMILNCPLTLTRTHKRLNNKGSYRWLPCHCSHSSTNKIAAEPVTVSLSIEGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG* | 234 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso10g0551 | 233 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 122 | 217 | IPR001179 | GO:0003755 | |
| Gso10g0551 | 233 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 10 | 233 | - | - | |
| Gso10g0551 | 233 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 126 | 220 | IPR001179 | GO:0003755 | |
| Gso10g0551 | 233 | SUPERFAMILY | FKBP-like | 97 | 220 | - | - | |
| Gso10g0551 | 233 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC | 10 | 233 | - | - | |
| Gso10g0551 | 233 | Gene3D | - | 86 | 224 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso10g0551 | Gso-Chr10 | 6164883 | 6169065 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso10g0551 | 115 | 219 | Calmodulin-binding Proteins | AT5G48570 | 32.727 | 1.69e-07 | 49.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso10g0551 | - | - | gmx:100305843 | 473.781 |